Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0669 ATGGGTATCGACGACGCCAATCTCGACGAGCACGATGGAAATGCCAAGGGCTATGCCCTTAGCGGCAAGATTATGCTTAGCGCTATCGTCGTTCTGTTCTTCGTCGTCATCCTAATGGTTTGCCTCCACCTCTACGCTCGTTGGTTCCTCTTACGCGCTCGCCGCCGTAATCGCCGCCGCCAGAACCACCGTCGTCCCCATCTCGTCTTCTACGTCGACCCCGCCGCCTCCGCCGTGGCCTCGCGCGGCCTCGATTCTGCTCTGCTCTCGTCTCTCCCTGTCTTCGCCTACTCCTCCAAGACCCACCCCGAGTGCGTTGAATGCGCGGTCTGCTTGTCGGAGTTCGAAGAGGGCGAAACGGGTCGGGTTTTGCCCAAATGCAACCACAGTTTCCATACCGACTGTATCGACATGTGGTTCAAGACCCACTCCACTTGCCCGCTTTGCAGGGCTCCGGTTGAACCCGAACCCGCGGGGGAGAACCGCCCCGAAGTGGTGATTACGGTGTGTGAACCGGGAGGGACCGAACCGGGCTCGAGTTCTGGGCTGTGCGCCGAGTGTGAACACGGAGGCGAGGAAGGAAACCGAACCGGCCACACGGTTtcttcgtcgtcgtcgtcgtcttcGATTGGGCCGAAGCAGAAGGCATCGTCACTGGTGGGTGTGACGGTGGAGGTTCCGAGAAGGAGCGAGATCTTCGGGGACGAGTCGAGTTGCGAGTCTCCGTCGACTCAGTCGTCGTTTAGGTCGCCGATGAGTCGTATGCTGTCGTTTAAGAGAATGCTTAGCAGAGATCGGAAAGGAAACCTTTCGCCATCGTCAGGAAGTACGAGTGAGTTAGAGAAAGGAGGACGAGATGAGACTCATGGGGACAGGCATGGCGCCAAGCGAGTAAGGAACCCCAGTGGTAGTAATCCACGAATCACTCTCAATGCCATGGCTGATGTGATAGAATTTCCCAGGGTAGTAATCAGATGCTTCCTGGGGTGTCAGCTTGGGCTTTACACCCGGCCACATCACCCTCTGCGACGCATCCCCACGCGGGCCCATATTGTTATACTCCTGAGCGATACAAGTCTCGTGATAGGTGTTCCCGATGAAAGTCATGTAACCCTTGGGGTTAAAGACGGAATCGATATAACTGTCCATAATCACGGTCTTCGCGAACTTCTTCCACGGCCGTCCCAAGTAGACTTGGGTCTCGCCGCCTCTCACCGGCGGGGGGCCGAAGTTGGCGTCGGGGATGAACCGGCAGCCTTGGAAGACGAGGGCGGTGGGGCCGTCGACCTTCTCTTTGCCGCCGGCGGCCACGATCACTTCCTGGCCGGCGAGTGGCCTGCGGACTATGAATGTGCAGTTCTGGAAGACGGCTTCGGCGTCGCCGAAGACGAAGTCGATGGTTCCCCATACGGTGACGTCGCGGTAGAATTGCCTGTACGCGTTCGCGTAGAGGGAGTCTTGCATTCCGTCCACGTGGCATCTGAATAG 1488 0.5726 MGIDDANLDEHDGNAKGYALSGKIMLSAIVVLFFVVILMVCLHLYARWFLLRARRRNRRRQNHRRPHLVFYVDPAASAVASRGLDSALLSSLPVFAYSSKTHPECVECAVCLSEFEEGETGRVLPKCNHSFHTDCIDMWFKTHSTCPLCRAPVEPEPAGENRPEVVITVCEPGGTEPGSSSGLCAECEHGGEEGNRTGHTVSSSSSSSSIGPKQKASSLVGVTVEVPRRSEIFGDESSCESPSTQSSFRSPMSRMLSFKRMLSRDRKGNLSPSSGSTSELEKGGRDETHGDRHGAKRVRNPSGSNPRITLNAMADVIEFPRVVIRCFLGCQLGLYTRPHHPLRRIPTRAHIVILLSDTSLVIGVPDESHVTLGVKDGIDITVHNHGLRELLPRPSQVDLGLAASHRRGAEVGVGDEPAALEDEGGGAVDLLFAAGGHDHFLAGEWPADYECAVLEDGFGVAEDEVDGSPYGDVAVELPVRVRVEGVLHSVHVASE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0669 495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 156 IPR013083 -
Sto4g0669 495 MobiDBLite consensus disorder prediction 280 298 - -
Sto4g0669 495 MobiDBLite consensus disorder prediction 196 216 - -
Sto4g0669 495 MobiDBLite consensus disorder prediction 174 306 - -
Sto4g0669 495 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Sto4g0669 495 SMART ring_2 108 149 IPR001841 -
Sto4g0669 495 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 14 232 - -
Sto4g0669 495 PANTHER RING-H2 FINGER PROTEIN ATL64 14 232 - -
Sto4g0669 495 Pfam Ring finger domain 107 150 IPR001841 -
Sto4g0669 495 MobiDBLite consensus disorder prediction 236 253 - -
Sto4g0669 495 SUPERFAMILY RING/U-box 88 156 - -
Sto4g0669 495 CDD RING-H2_PA-TM-RING 107 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0669 Sto-Chr4 4383305 4389095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0669 9 286 Rapid Response to Elicitors AT3G16720 51.307 4.71e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0669 - - jre:108987300 300.056