Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0643 ATGGAGACAGTTCTATCCAAACACTCTGCACCTCTTGTTTTGAAGGGTGTgcaaaagaaagaggaagaagaattgcTTGGACAAGCTACAATATGGAAGCTCATGCTCAGCTTCATGGACTCTTTCGCTCTAAAAGCCGCCGTCGAGCTTCGTATCGCCGACATTATAGACCACCACGGCCGTCCCATCTCCCTCCAAACAATCCTCAACAACATCTCTGACGCGCCCTCCCCTGACATCTCCTTCCTCCACCGTGTCATGCGTCACCTTGTTCGCAAGAACATCTTCTCTTCACAACAATCTGAGCTCAATGACACCCTCTATGACTTAACCCCGGCTTCCAAATGGCTCTTACGTGACTCCAAGTCCACCTTGGCTCCTATGATTCTCCTTGAGAACCATCCTTTACATTTGGACCCATCTCACTACCTTAGCCATAGCATCAGAGAAGGCACCAAGAATGGATCGGCCTTTTTCAAATGCCATGGGCATGAGCAGTTTGACTTGACTGGGTTGGACCCTGAGTTTAACAAATTGTTCAATGAAGGCATGGCATGTACAGCTAGGATTGTTTCCAAAGCTGTTACCTCTGGGTACAAAGAGGGGTTCAAAAAGATTCAATCTTTGGTGGATGTGGGAGGTGGCATTGGAGGATCGCTATCTGGGATTGTTCGAGCCTACCCACTTATCAAAGGTATCAACTTTGATTTGCCCCATGTGGTTGCCACTGCTCCCAAGTACGATGGAATCACCCATGTTGGGGGAAACATGTTCCAGTCCATTCCTAAAGCTGATGCTGTATACATGAAGTGGATTCTGCATGATTGGAGCGACCAGGAGTGCGTCCAGATATTGAAGAACTGCAGGAAGGCAATACCAGAAAAGACAGGGAAGGTGATTATTGTGGATCACGTTCTGCATCCACAAGGGAATGGGATATTTGAAGACACAGGCTTTGCATTTGACATGATGCTGCTTACTCACAATGGTGGAGGGAAGGAAAGGACAGAGGAGGATtggaagaagttgtttcaacaaGCTGGCTTCCTTCGTTACAATATCATCAATATCAATGCCTTCCCATCCAACATCATTGAGGCCTTCCCCATCTGA 1113 0.4555 METVLSKHSAPLVLKGVQKKEEEELLGQATIWKLMLSFMDSFALKAAVELRIADIIDHHGRPISLQTILNNISDAPSPDISFLHRVMRHLVRKNIFSSQQSELNDTLYDLTPASKWLLRDSKSTLAPMILLENHPLHLDPSHYLSHSIREGTKNGSAFFKCHGHEQFDLTGLDPEFNKLFNEGMACTARIVSKAVTSGYKEGFKKIQSLVDVGGGIGGSLSGIVRAYPLIKGINFDLPHVVATAPKYDGITHVGGNMFQSIPKADAVYMKWILHDWSDQECVQILKNCRKAIPEKTGKVIIVDHVLHPQGNGIFEDTGFAFDMMLLTHNGGGKERTEEDWKKLFQQAGFLRYNIININAFPSNIIEAFPI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0643 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 369 IPR016461 GO:0008168
Sto4g0643 370 PANTHER O-METHYLTRANSFERASE 21 369 IPR016461 GO:0008168
Sto4g0643 370 Gene3D - 15 117 IPR036388 -
Sto4g0643 370 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 21 369 - -
Sto4g0643 370 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Sto4g0643 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 366 IPR029063 -
Sto4g0643 370 Gene3D Vaccinia Virus protein VP39 119 370 IPR029063 -
Sto4g0643 370 SUPERFAMILY "Winged helix" DNA-binding domain 21 121 IPR036390 -
Sto4g0643 370 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Sto4g0643 370 Pfam O-methyltransferase domain 142 349 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0643 Sto-Chr4 4155036 4157583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0643 42 366 Monolignol Biosynthesis Gene Families AT5G54160 38.671 2.02e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0643 K22588 - gmx:100800801 558.91