Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0600 atGGCCACACATTCTTTACTCTTACCTGAAACTAACGACGCCGTTTCCAACTTCAAATTCCCTATTTCTTCTTCCTTAACTGCCGTAATCCACAATTCGGTGGATTCTTCCTCCCTGAAGCGCAAGAGGCCTCCGAGGATTGAGATTCCCAATGTCTTGCGAGAAATCCAGACGGAGAAGCTCGTTGATTCCAAGGAAAAGGAGGGTGTTTCCTGTGGTGGagttggttttggggttttttcTGTGAAAGGCAAGAAGATGTGCATGGAAGATACTCACAAGATTGGCTTCTTTGGTGTCTATGATGGGCATGGTGGCAAGAAGGCTGCGGAGTTTGTGGCTGAGAACTTGCACACCAACATTCTCAGAATGATGGAGAATTGTCAAGAGTCTAAGGCTAAGGTGGAAGCAGTTAAAGCTGGGTATCTCAAGACAGATGAGGAATTCTTGAAACAGGCAACTGACTCAGTCGCTAATCATATAATTAAAGGACCAATTGAACTCTTAACTCTTAAGTTCATTGATGTAGGCAGTGGTGCGTGTTGTGTCACAGCGTTGATAGAAGGGCAGGAGATAGTTGTTTCAAACGTGGGAGATTGCAGGGCTGTTCTTTGTAGAGGTGGAGTGGCTGAAGTTCTCACAAGAGATCACAGAGCAGAAATGGAAGATGAAAGGAGAAGAATTGAGGATAAGGGAGGATATGTGGAGATTCATCGAGGAGTATGGAGAGTTCATGGGGTACTTTCTGTTTCCAGAAGTATAGGAGATGCTCATCTAAAGGACTGGGTGGTGGCTGAGCCTGATACAAAGATTTTACAATTGACTTCAGATATGGAGTTTCTTGTCTTGGCTTCTGATGGACTGTGGGAAGAGGTTGGAAGCCAAGAAGCTATTGATACTGTGACACGTTTATGTCGAAATGAAGAGAAGCTGAGTTCCTCTGGAGATCTACAGAACAGTATTACTGACGAAGATTCCGGTCGCGTGACTGTAAGTCCTTCGTCGAAGCTACGGAGAGTCTCACTTGTCAAGAAGCCAAGGGGCCGTAAGAAGACATTGAATTGCAGGAATGAAGATGGTGAAGATGATGACTTTGGTTGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATTTCAATGGTGAAGCGAGTAAACATGAAAAAGGAGACGACGACACACGTAAAAGACAGCAACAACAACATCATGTGCAAGAAAAATGCAACCACTACTATTGGAATTCTGGCTGCTTGTAAGGAGCTTGTGAATCTTGCTGTGAAAAGGGGGACTTTGGATGATATTACTGTCATGTTGCATAGGTTTATTATACTTTATATGAAATAG 1344 0.4301 MATHSLLLPETNDAVSNFKFPISSSLTAVIHNSVDSSSLKRKRPPRIEIPNVLREIQTEKLVDSKEKEGVSCGGVGFGVFSVKGKKMCMEDTHKIGFFGVYDGHGGKKAAEFVAENLHTNILRMMENCQESKAKVEAVKAGYLKTDEEFLKQATDSVANHIIKGPIELLTLKFIDVGSGACCVTALIEGQEIVVSNVGDCRAVLCRGGVAEVLTRDHRAEMEDERRRIEDKGGYVEIHRGVWRVHGVLSVSRSIGDAHLKDWVVAEPDTKILQLTSDMEFLVLASDGLWEEVGSQEAIDTVTRLCRNEEKLSSSGDLQNSITDEDSGRVTVSPSSKLRRVSLVKKPRGRKKTLNCRNEDGEDDDFGCENESPPSKSRRISMVKRVNMKKETTTHVKDSNNNIMCKKNATTTIGILAACKELVNLAVKRGTLDDITVMLHRFIILYMK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0600 447 MobiDBLite consensus disorder prediction 356 375 - -
Sto4g0600 447 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Sto4g0600 447 PANTHER PROTEIN PHOSPHATASE 2C 14-RELATED 29 158 - -
Sto4g0600 447 PANTHER PROTEIN PHOSPHATASE 2C 14-RELATED 176 439 - -
Sto4g0600 447 ProSiteProfiles PPM-type phosphatase domain profile. 76 441 IPR001932 -
Sto4g0600 447 SMART PP2C_4 61 439 IPR001932 -
Sto4g0600 447 Gene3D - 73 442 IPR036457 -
Sto4g0600 447 CDD PP2Cc 75 313 IPR001932 -
Sto4g0600 447 PANTHER PROTEIN PHOSPHATASE 2C 29 158 IPR015655 GO:0004722|GO:0006470
Sto4g0600 447 PANTHER PROTEIN PHOSPHATASE 2C 176 439 IPR015655 GO:0004722|GO:0006470
Sto4g0600 447 SUPERFAMILY PP2C-like 73 441 IPR036457 -
Sto4g0600 447 Pfam Protein phosphatase 2C 86 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0600 Sto-Chr4 3816509 3819300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0600 3 438 PP2C-type Phosphatase Gene Family AT1G67820 47.033 6.30e-119 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0600 - K17506 qlo:115982599 493.426