Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0596 ATGGGACTCTCCAACTTCCCTAGTGCAGCGGAAGGAGTGCTTCCTGTGCTGGTAATCAATACTGTTCTATCAGTGGCTCTCTTGAAGAACATGTTTCGATCCATTCTCCATTTGCTCGGTgctgctgcttcttcttcttcttcttcttcgtcgttTTCTTCGAATCCGAATACGGAGGCGGAGGCTGATTCAGATTCCGATGGTGggaggaagaggaggatttcGATTACGCGGTACAGGTCGTTGAGTAGGAGTAGGAGTGGGAGAGATTGGGGGATGGTGGAGTGCTGTGTGTGTCTGTGTGGATTCCAAGGGAGTGAAGAGGTGAGTGAATTGTCTTGCAAGCATTTCTTCCATAAAGCTTGCTTGGAGAAGTGGTTTCGTAATAGACAGTACTCCACCTGCCCTCTCTGTCGCTCCATtgattag 429 0.4242 MGLSNFPSAAEGVLPVLVINTVLSVALLKNMFRSILHLLGAAASSSSSSSSFSSNPNTEAEADSDSDGGRKRRISITRYRSLSRSRSGRDWGMVECCVCLCGFQGSEEVSELSCKHFFHKACLEKWFRNRQYSTCPLCRSID 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0596 142 SMART ringv_2 95 139 IPR011016 GO:0008270
Sto4g0596 142 MobiDBLite consensus disorder prediction 43 62 - -
Sto4g0596 142 ProSiteProfiles Zinc finger RING-type profile. 96 139 IPR001841 -
Sto4g0596 142 SUPERFAMILY RING/U-box 95 140 - -
Sto4g0596 142 PANTHER - 1 141 IPR044249 -
Sto4g0596 142 Pfam Ring finger domain 95 139 IPR001841 -
Sto4g0596 142 PANTHER F21J9.24-RELATED 1 141 - -
Sto4g0596 142 SMART ring_2 96 138 IPR001841 -
Sto4g0596 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 141 IPR013083 -
Sto4g0596 142 MobiDBLite consensus disorder prediction 43 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0596 1 140 C3H Transcription Factor Family AT2G04240 38.000 6.21e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0596 K16285 - zju:107428465 149.828