Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto4g0568 | ATGGCCATTACACCTTTGGGAAGTACGTCTGTGGCACAATGGGGAATTCGTCCTCAGTTTTTCCTAAGATCCTGTATGACGAACAAGATTACATCATCTGGCTATAGTATTACAAGCAGGGTAAGCTTTTTGGCGGCCCCAAGTTCAGGTTTTTTTTCTCATGATTCCTTGCATGCACTATATGACCTGGGTTCATCTCATACTTTTCATCGTCGCAAGGGATCAAGGTTCATAGTCAGAGCAGATGCAGATTACTATTCTGTCCTCGGGGTTTCAAAAAGTGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGAACCTGGAGCAGAACAGAAGTTTAAGGAAATTAGCAATGCATATGAgGTCTTATCAGATGATGAGAAACGATCTATATATGACAGATATGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGTAATCCTTTTGATCTGTTTGAGACACTGTTTGAGGGCATGAATCGTGGAACCAGAGGTGCTTGGAATGGAGCACTTGATGGTGAAGATGAGTACTATAGTCTTGTCTTGAACTTTAAGGATGCAGTTTTtggaatagaaaaagaaatagaggTAAGCCGACTAGAGAGCTGTGGAACTTGCAATGGTACAGGGGCTAAGCCAGGGACTAAGGCATCCAGATGTAGCACTTGCGGGGGTCAAGGTAGGGTTGTCTCATCAACAAGGACACCATTAGGTATCTTCCAACAGTCGATGACATGCTCTTCATGCAATGGGAGTGGAGAAATTTCGACACCTTGCAATGCATGTTCTGGAGATGGTCGAGTGAGGAGAACAAAACGGATTAGTCTGAAAGTCCCTGCCGGTGTGGACTCTGGCAGCCGTTTAAGAGTCCGAAATGAGGGGAATGCTGGAAGGAGAGGTGGTTCTCCTGGTGACCTCTTTGTTGTTATTGAAGTCATCCCCGATCCCGTCCTAAAACGCGATGACACCAACATTTTATACACTTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTACAATCAAGGTTCCTACTGTGGATGGCATGGTGGATTTAAAAATTCCTGCTGGGACCCAACCGAACACAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTCCTGAATAAAAACAACATGAGGGGTGATCAATTAGTTCGGGTGCAAGTTGAAATCCCCAAAAGACTCAGCAGCGATGAGAGGAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGGTAAGACTGCGACCAGCAAGAGATGA | 1314 | 0.4384 | MAITPLGSTSVAQWGIRPQFFLRSCMTNKITSSGYSITSRVSFLAAPSSGFFSHDSLHALYDLGSSHTFHRRKGSRFIVRADADYYSVLGVSKSASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGMNRGTRGAWNGALDGEDEYYSLVLNFKDAVFGIEKEIEVSRLESCGTCNGTGAKPGTKASRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGSGEISTPCNACSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMAKKGVPFLNKNNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTATSKR | 437 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto4g0568 | 437 | SUPERFAMILY | Chaperone J-domain | 81 | 176 | IPR036869 | - | |
| Sto4g0568 | 437 | Pfam | DnaJ central domain | 220 | 283 | IPR001305 | GO:0031072|GO:0051082 | |
| Sto4g0568 | 437 | Gene3D | - | 220 | 283 | - | - | |
| Sto4g0568 | 437 | CDD | DnaJ_zf | 220 | 283 | IPR001305 | GO:0031072|GO:0051082 | |
| Sto4g0568 | 437 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 32 | 437 | - | - | |
| Sto4g0568 | 437 | CDD | DnaJ | 84 | 137 | IPR001623 | - | |
| Sto4g0568 | 437 | Gene3D | - | 330 | 437 | - | - | |
| Sto4g0568 | 437 | Gene3D | DnaJ domain | 81 | 184 | IPR036869 | - | |
| Sto4g0568 | 437 | Gene3D | - | 190 | 325 | - | - | |
| Sto4g0568 | 437 | SMART | dnaj_3 | 83 | 140 | IPR001623 | - | |
| Sto4g0568 | 437 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 188 | 342 | IPR008971 | GO:0006457|GO:0051082 | |
| Sto4g0568 | 437 | ProSitePatterns | Nt-dnaJ domain signature. | 125 | 144 | IPR018253 | - | |
| Sto4g0568 | 437 | PRINTS | DnaJ domain signature | 86 | 104 | IPR001623 | - | |
| Sto4g0568 | 437 | PRINTS | DnaJ domain signature | 104 | 119 | IPR001623 | - | |
| Sto4g0568 | 437 | PRINTS | DnaJ domain signature | 120 | 140 | IPR001623 | - | |
| Sto4g0568 | 437 | PRINTS | DnaJ domain signature | 140 | 159 | IPR001623 | - | |
| Sto4g0568 | 437 | Pfam | DnaJ C terminal domain | 195 | 410 | IPR002939 | - | |
| Sto4g0568 | 437 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 207 | 286 | IPR036410 | - | |
| Sto4g0568 | 437 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 335 | 421 | IPR008971 | GO:0006457|GO:0051082 | |
| Sto4g0568 | 437 | Pfam | DnaJ domain | 84 | 145 | IPR001623 | - | |
| Sto4g0568 | 437 | ProSiteProfiles | Zinc finger CR-type profile. | 207 | 288 | IPR001305 | GO:0031072|GO:0051082 | |
| Sto4g0568 | 437 | CDD | DnaJ_C | 191 | 413 | - | - | |
| Sto4g0568 | 437 | PANTHER | BNAA01G34580D PROTEIN | 32 | 437 | - | - | |
| Sto4g0568 | 437 | TIGRFAM | DnaJ_bact: chaperone protein DnaJ | 84 | 426 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
| Sto4g0568 | 437 | ProSiteProfiles | dnaJ domain profile. | 84 | 148 | IPR001623 | - | |
| Sto4g0568 | 437 | Hamap | Chaperone protein DnaJ [dnaJ]. | 81 | 433 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto4g0568 | Sto-Chr4 | 3550440 | 3554583 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto4g0568 | 85 | 147 | C2H2 Transcription Factor Family | AT1G74250 | 44.928 | 1.44e-09 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto4g0568 | K03686 | - | gmx:100811006 | 759.985 |