Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0565 TTGCTCGATTCAGGAGATGCACTATTTGCATTAAAGCTATCGTTGAATGCTTCAGCTAACCAGCTTACTGACTGGAATCAAAATCAAGTAAACCCTTGTACTTGGTCCCGTGTGTACTGTGACCAGAATTACAATGTTGTTCAAGTTTCACTAGCATTGATGGGATTTACCGGAATCTTGACCCCCAGAATAGGAGCATTAAAAAGTCTTACAACTCTTTCATTGCAAGGGAATGGCATAACTGGTGACATACCAAAAGAATTAGGAAATCTGACAAGCTTGATCAGGCTGGATTTGGAAAACAACAGATTAACTGGTGAAATACCATCTTCCCTTGGTAATCTTAAAAGGCTTCAATTCTTAACTTTGAGTCAAAACAATCTCAGTGGGATTATTCCTGAATCACTTGCCAGTATCCCAAGCTTGATCAATGTTCTGCTGGACGCAAATGATCTCAGTGGTCAAATACCTGAGCAGTTATTTAAAGTTCCTAAATACAATTTCACTGGAAATAAGTTGAATTGTGGCATGAATTATCGTCACCCTTGTGCTTCTGATAGTTCAGAACAAGGTGCATCACATAAGCCAAAAATTGGCCTTATAGTTGGAATTATTGTTGGGTTAATAGTTATCATTTTTCTTGGTGGTCTGCTATTCTGGTGTAAGGGCAGACGCAGGGGCTACAAGCGTGAAGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGGAGAATTGCATTTGGGCAACTAAAAAGATTTGCATGGAGAGAACTACAGATAGCCACAGACAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAGGGTGTTCTCGCTGATAACACAAAAGTTGCTGTGAAAAGGTTAACTGATTATGAAAGTCCTGGGGGAGATGCAGCTTTCCAAAGGGAAGTTGAGATGATAAGTGTTGCTGTCCATCGTAACCTATTACGGTTGATTGGGTTCTGTACTACTCCAACTGAACGTCTCCTAGTTTATCCCTTCATGCAGAACTTAAGCGTTGCCTATCGTCTACGagCTCCTGAATACCTGTCCACGGGGAAATCTTCTGAGAGGACTGATGTTTTCGGTTATGGGATTATGCTTTTGGAACTTGTCAAGAAGCTAGAGCGGGAAAAACGTCTAGATGCCATTGTTGACTGCAAcctaaataaaaattacaacaTACAAGAGGTTGAAATGATGATACAAGTTGCATTACTCTGCACCCAAGCTTCACCGGAGGACCGTCCGGCTATGTCAGAGGTTGTCAGAATGCTAGAAGGAGAAGGACTGGCTGAAAGGTGGGAAGAATGGCAACATGTAGAGGTTACTCGGAGGCAAGAATATGAAAGACTACAAAGAAGATTTGATTGGGGAGAAGATTCTATTTATAATCAAGATGCCATTGAATTGTCTGGTGGAAGATGA 1446 0.4059 LLDSGDALFALKLSLNASANQLTDWNQNQVNPCTWSRVYCDQNYNVVQVSLALMGFTGILTPRIGALKSLTTLSLQGNGITGDIPKELGNLTSLIRLDLENNRLTGEIPSSLGNLKRLQFLTLSQNNLSGIIPESLASIPSLINVLLDANDLSGQIPEQLFKVPKYNFTGNKLNCGMNYRHPCASDSSEQGASHKPKIGLIVGIIVGLIVIIFLGGLLFWCKGRRRGYKREVFVDVAGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRAPEYLSTGKSSERTDVFGYGIMLLELVKKLEREKRLDAIVDCNLNKNYNIQEVEMMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVTRRQEYERLQRRFDWGEDSIYNQDAIELSGGR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0565 481 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Sto4g0565 481 Gene3D Ribonuclease Inhibitor 3 184 IPR032675 -
Sto4g0565 481 PANTHER LRR RECEPTOR-LIKE KINASE 374 481 - -
Sto4g0565 481 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 374 481 - -
Sto4g0565 481 SUPERFAMILY Protein kinase-like (PK-like) 249 458 IPR011009 -
Sto4g0565 481 Pfam Protein tyrosine and serine/threonine kinase 267 350 IPR001245 GO:0004672|GO:0006468
Sto4g0565 481 ProSiteProfiles Protein kinase domain profile. 264 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0565 481 Pfam Leucine rich repeat N-terminal domain 3 41 IPR013210 -
Sto4g0565 481 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 351 - -
Sto4g0565 481 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 352 378 - -
Sto4g0565 481 PANTHER LRR RECEPTOR-LIKE KINASE 352 378 - -
Sto4g0565 481 SUPERFAMILY L domain-like 6 171 - -
Sto4g0565 481 Gene3D Phosphorylase Kinase; domain 1 233 336 - -
Sto4g0565 481 Pfam Leucine rich repeat 69 128 IPR001611 GO:0005515
Sto4g0565 481 PANTHER LRR RECEPTOR-LIKE KINASE 5 351 - -
Sto4g0565 481 Gene3D Transferase(Phosphotransferase) domain 1 337 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0565 Sto-Chr4 3538376 3544407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0565 352 481 Receptor kinase-like Gene Family AT5G10290 75.163 2.21e-67 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto4g0565 PK_Tyr_Ser-Thr 8.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0565 - - gmx:100793416 597.816