Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0439 ATGGCTGAAAGCAAGCGCAATGGTCTTGAAAATCAACAGGGCATTGAGCATATACTCTCAGAAGCGCAATTTCGATGGTTACGTCCAGCtgaaatttgtgaaattcttcGTAATTATAAGAAGTTTCATATTGCTCCAGAACCTGCAAATATGCCACCAAGTGGTTCACTTTTCCTATTTGATCGGAAAGTGCTGAGATACTTCAGAAAAGATGGCCATAACTGGAGGAAGAAAAAAGATGGAAAAACAGTGAAGGAAGCTCATGAAAAACTTAAGGAAGGAAGTGTGGATGTGTTGCACTGCTACTACGCCCAtggagaagaaaatgaaaattttcaaagacGCAGTTACTGGATGCTAGAAGAGGAGCTCTCACACATTGTTCTCGTCCACTATCGTGAAGTGAAGGGAACTAGGGCTGCCAATTCTAAATGTGCTAAAGACAATGAAGAAGCATTTCCCTGTGCCCAACAAACTGACAAAGCTATGCCCAGCACAGAGACGGACACTTCTTtgttgtctagccttcacccaAATAGTTACCAGGTTCCTTCACAAACTATGGATACAGCAAGCATGAGCAGTGCTCAGGCATCAGAATATGAAGAAGCTGAATCCGCATTCAATAACCATGCCACCTCCCAGTTCTACTCTTTCCTTGAGCTGCAACAACCTGGGGCTGAGAAGACTAATGCTGAACTCCCTGATCCTTATCATCCTCTGccatttttaaATAATCAAGGCAAGTTTTCACACAGTCCAGAAGTGGATTATATCCCACTTGGTCAAGCCAATAAAACTAAAGACATTGTTGATGGTGGCTTAATGTGTGAACCCCAAAAGGACCTTGGGTTTTCATCATGGGAAGATGTCTTAAAAAATAACTCTGGAAGTCAACCTGAGCATTTTCATCACTCGTTGCATAAAATACATCCAAATACGATGGGATTCAATAGCAATTCCTCTCATGGAGATGAGATAATGCGGCAACATTTGACCAGCAGCATAGCTAAACAGTATGATAATTGGAATATCGTACAAACTCAAGGAAATTGGCAGGCTTCTGGTAGTAATTCTTCACGCTTGCCCAGTTGGCCCACAAGTGTGCCTCCAGGCGCTGTCTCTGAGGTTAGTTCTAAGCACTATGAGCAAGAAGTTCATGAAGTTGACTGTCAAAAGTCCCTGGAGAAGTATCTTGTACATCCAGACAAGCAAAACAAATGTCTCAAGAAAAATGATCTCCAAGAGGAGCTTTTAAATGAAAAAGACAACTATAGAGTAAAATCAGATCTCGAGAAAAGTACGAGTCTTGATGAAATGGACGACAACACTTATTTAACTTTAAAGAAAACTCTCTTAGATGGATCTGCTACAGAAGAGGGTCTGAAAAAGCTTGACAGTTTCAACCGATGGATGAGTAAAGAACTTGAGGATGTAGATGAACTGCATATACAATCTACTTCTGGTGCATATTGGGATACAGTTGAAAGGGAAAACGGGGTTGACAGCACAACCTTTTCTCCCCATGTGCACTTGAACACCTATCCTCTGGACCCATCTCTTTCCTATTGTCAGCTTTTTAGCATTATTGACTTTTCACCTAGCTGGACATATGAAAATTCAAAAGTTAAGGTCCTTATTTCTGGAAAATTCTTAAGGAGTCAACAAGAAGCAGAAAATTGTAAATGGTCATGCATGTTTGGGGAGGTAGAAGTTCCTGCAGAGGTTATCAGTAATGGCGTTCTTCGTTGTCATACTCCTCTGCACAAGGCTGGGAGGGTTCCTTTCTATGTAACATGTTCCAATAGATTAGCATGTAGTGAAGTTCGAGAATTTGATTTCCGAGAAAACCGTATTGTAGAAGCCAAAACTACAGATGAGAAAAGAGGCAGTGACTTTGAAATACTTAGTATGCGATTTGATCAACTATTGTCTTTGGGGTCTGCCTTCCCTCAACATTTAGAATCCATTAGTGTAAGTGAGAAATTTCagctaggaaaaaaaatcaGTTCTTTGCTGAGAGAGGAGACTGACAAATGGGACATTTTACTGAAACTCTCTTTAGAGGAAGGTTTTTCTCCTGAATATGCACACGAGCAGCTGCTTCAAAAGCTTCTGAAAGAAAAGTTGCTGGCTTGGCTCCTTCAGAAAATTACTGAAGATGGGAAAGGTCCCAATGTATTAGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCGGCTGCTCTTGGCTATGATTGGGCCCTTCAACCTACAATAGTTTCAGGTGTGAATGTTAACTTCCGTGACGTAAATGGATGGACTGCTCTTCATTGGGCAGCAATTTACGGCAGGGAGCGCACAGTTGCTTCCCTGGTCTCTCTTGGTGCAGCGCCTGGAGCTCTGACTGATCCGTGCCCAAAGTATCCTTCTGGTAGAACGCCTGCTGACCTAGCTTCTGCAAATGGACACAAAGGGATTGCAGGGTATCTTGCAGAATCTGCCCTGAGTGCACACCTCTTATCTCTTAATTTGAATAGGGAAGGTGGTGCTATAGAAAAATGTGGAGCAAAAGATGTACAAAGAGTTCaagaacaaaataaaactaCAGTTAATGCTGGAGACATATCATACGGCCTGTCATTGAAAGATTCACTAGCTGCAGTATGTAATGCCACCCAAGCTGCCGCTCGAATTCATCAAGTTTTCAGAGTGCAGTCATTCCAGAGAAAACAGTTGAAAGAATATGGTGATGACAAATTTGGAATATCTGATGAAGATGCTCTTTCACTTATAACAGTCAAGTCGCGACAGCATGATGAGCCTGTCCATGCTGCAGCAATACAAATCCAGAAGAAGTTCCGTAGTTGGAAGGGCAGAAAAGATTTTTTGATAATCCGGCAGCAAATAGTGAAAATTCAGGCTCATGTAAGAGGCCACCAGGTCAGGAAAAACTATAGAAAGATAGTATGGTCTGTTGGAATTATGGAGAAGGTTATTCTACGTTGGCGTCGAAAAGGCTGTGGTTTACGTGGGTTTAAATCAGAAGCCATCACCGAGAACACTATGGTACAAGATATATCTTCCAAGGAGGATGACTACGATTTTCTCAAAGAAGGCAGGAAGCAAACTGAAGAAAGGATGCAAAAAGCCCTAGCCAGGGTGAAGTCAATGGTTCAGTACCCAGAAGCAAGAGATCAATACCGTAGGCTGTTGAATGTTGTAAATGAGGTTCATGAAACTCAGGTAAAGTATGATCGGAGTTCAAACAATTCCGAAGAAACAAACGAATATAATGTCCTTATTGATCATGAAGCGTTGTTTGACGAAGATACTTATATGCCTACAGCTTAG 3330 0.4069 MAESKRNGLENQQGIEHILSEAQFRWLRPAEICEILRNYKKFHIAPEPANMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKEGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGTRAANSKCAKDNEEAFPCAQQTDKAMPSTETDTSLLSSLHPNSYQVPSQTMDTASMSSAQASEYEEAESAFNNHATSQFYSFLELQQPGAEKTNAELPDPYHPLPFLNNQGKFSHSPEVDYIPLGQANKTKDIVDGGLMCEPQKDLGFSSWEDVLKNNSGSQPEHFHHSLHKIHPNTMGFNSNSSHGDEIMRQHLTSSIAKQYDNWNIVQTQGNWQASGSNSSRLPSWPTSVPPGAVSEVSSKHYEQEVHEVDCQKSLEKYLVHPDKQNKCLKKNDLQEELLNEKDNYRVKSDLEKSTSLDEMDDNTYLTLKKTLLDGSATEEGLKKLDSFNRWMSKELEDVDELHIQSTSGAYWDTVERENGVDSTTFSPHVHLNTYPLDPSLSYCQLFSIIDFSPSWTYENSKVKVLISGKFLRSQQEAENCKWSCMFGEVEVPAEVISNGVLRCHTPLHKAGRVPFYVTCSNRLACSEVREFDFRENRIVEAKTTDEKRGSDFEILSMRFDQLLSLGSAFPQHLESISVSEKFQLGKKISSLLREETDKWDILLKLSLEEGFSPEYAHEQLLQKLLKEKLLAWLLQKITEDGKGPNVLDEGGQGVLHFAAALGYDWALQPTIVSGVNVNFRDVNGWTALHWAAIYGRERTVASLVSLGAAPGALTDPCPKYPSGRTPADLASANGHKGIAGYLAESALSAHLLSLNLNREGGAIEKCGAKDVQRVQEQNKTTVNAGDISYGLSLKDSLAAVCNATQAAARIHQVFRVQSFQRKQLKEYGDDKFGISDEDALSLITVKSRQHDEPVHAAAIQIQKKFRSWKGRKDFLIIRQQIVKIQAHVRGHQVRKNYRKIVWSVGIMEKVILRWRRKGCGLRGFKSEAITENTMVQDISSKEDDYDFLKEGRKQTEERMQKALARVKSMVQYPEARDQYRRLLNVVNEVHETQVKYDRSSNNSEETNEYNVLIDHEALFDEDTYMPTA 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0439 1109 ProSiteProfiles IQ motif profile. 958 982 IPR000048 GO:0005515
Sto4g0439 1109 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 4 1073 - -
Sto4g0439 1109 SMART ANK_2a 764 793 IPR002110 GO:0005515
Sto4g0439 1109 SMART ANK_2a 803 832 IPR002110 GO:0005515
Sto4g0439 1109 Pfam Ankyrin repeats (3 copies) 736 826 IPR002110 GO:0005515
Sto4g0439 1109 SUPERFAMILY E set domains 529 614 IPR014756 -
Sto4g0439 1109 MobiDBLite consensus disorder prediction 352 374 - -
Sto4g0439 1109 SMART CG_1_2 18 136 IPR005559 GO:0003677
Sto4g0439 1109 ProSiteProfiles Ankyrin repeat region circular profile. 764 789 - -
Sto4g0439 1109 Pfam IQ calmodulin-binding motif 936 955 IPR000048 GO:0005515
Sto4g0439 1109 Pfam IQ calmodulin-binding motif 962 979 IPR000048 GO:0005515
Sto4g0439 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 923 985 IPR027417 -
Sto4g0439 1109 Gene3D Immunoglobulins 522 618 IPR013783 -
Sto4g0439 1109 Gene3D - 696 834 IPR036770 -
Sto4g0439 1109 SMART iq_5 934 956 IPR000048 GO:0005515
Sto4g0439 1109 SMART iq_5 957 979 IPR000048 GO:0005515
Sto4g0439 1109 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Sto4g0439 1109 SUPERFAMILY Ankyrin repeat 710 825 IPR036770 -
Sto4g0439 1109 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 4 1073 - -
Sto4g0439 1109 Gene3D - 933 982 - -
Sto4g0439 1109 Coils Coil 1019 1046 - -
Sto4g0439 1109 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Sto4g0439 1109 ProSiteProfiles Ankyrin repeat profile. 764 796 IPR002110 GO:0005515
Sto4g0439 1109 Pfam IPT/TIG domain 529 603 IPR002909 -
Sto4g0439 1109 ProSiteProfiles IQ motif profile. 936 964 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0439 Sto-Chr4 3424218 3432319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0439 1 1091 CAMTA Transcription Factor Family AT5G64220 46.320 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sto4g0439 Ank_2 6.8e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0439 K21596 - gmx:100783055 1468.75