Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0416 ATGGCCGCAGCAATAGGTAtgtacaataacaataatagcaTGATACTACCAGATTTGTTAGATCCATACAGCGATCAAGATCTGATGAAAGCACTCGAACCTTTTATGAAAAGTGATTCATCTTCGTTTTCCTCATCATGCTCTAATTTTCCTGGTTTTTATTGCCCACCATCGAACTACGACCAAAAGGGTTCAATAAGGCTTAACCAACTCACGCCATCTCAAATCCATCAGATTCAAGCCCAATTCCAAAGCCCAGCCCAACAAAACCCATTCCTAGGCCCAAAATCGCTTCCCATGAAACACGTCCGAAGCAATCCTCCGAAGGCGGCGAAGCTGTACAGAGGAGTGAGGCAGAGGCATTGGGGGAAATGGGTGGCTGAGATTCGACTCCCCAAGAACCGCACGCGCCTCTGGCTCGGCACTTTCGACACCGCCGAGGAAGCCGCGCTGGCGTACGACAGCGCCGCCTTCAAGCTCCGCGGGGATCTCGCACGCTTGAACTTCCCCCATCTCCGCCACCGTGGATCGCACGTGTTTGGGGAGTTCGGGAATTACAAGCCCCTCCATCCCTCCGTCAACGCCAAGCTTCAAGCCATTTGTGAAACCTTGGAAATCTCTCCGACATCATCGTCATCGTCCTCGTCGTCGTCATCATCGGATGAATCATGGGCTGCTTCTTCGTCTTCCCCTGAATCCGACATCAATTTCCTGGATTTCTCAGATTCCAAGGACGAAATTGAGGTGCGTGACTTTGGGATTAGCAGTGATCTGCAATGGAGTTTTTGA 789 0.4981 MAAAIGMYNNNNSMILPDLLDPYSDQDLMKALEPFMKSDSSSFSSSCSNFPGFYCPPSNYDQKGSIRLNQLTPSQIHQIQAQFQSPAQQNPFLGPKSLPMKHVRSNPPKAAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDSAAFKLRGDLARLNFPHLRHRGSHVFGEFGNYKPLHPSVNAKLQAICETLEISPTSSSSSSSSSSSDESWAASSSSPESDINFLDFSDSKDEIEVRDFGISSDLQWSF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0416 262 Pfam AP2 domain 114 162 IPR001471 GO:0003700|GO:0006355
Sto4g0416 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 1 205 - -
Sto4g0416 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 210 248 - -
Sto4g0416 262 MobiDBLite consensus disorder prediction 207 235 - -
Sto4g0416 262 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Sto4g0416 262 PRINTS Ethylene responsive element binding protein signature 136 152 IPR001471 GO:0003700|GO:0006355
Sto4g0416 262 ProSiteProfiles AP2/ERF domain profile. 113 170 IPR001471 GO:0003700|GO:0006355
Sto4g0416 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 210 248 - -
Sto4g0416 262 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 205 - -
Sto4g0416 262 SUPERFAMILY DNA-binding domain 113 171 IPR016177 GO:0003677
Sto4g0416 262 SMART rav1_2 113 176 IPR001471 GO:0003700|GO:0006355
Sto4g0416 262 Gene3D AP2/ERF domain 113 171 IPR036955 GO:0003700|GO:0006355
Sto4g0416 262 CDD AP2 112 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0416 Sto-Chr4 3235185 3236088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0416 3 260 AP2-EREBP Transcription Factor Family AT4G39780 48.780 1.27e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto4g0416 AP2 3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0416 K09286 - gmx:100815162 258.84