Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0394 CTGGCGACTACACTGGCTTGGAGGTCGGCTGCCAGCAATGGCAGCAGCCTTACTGCTAATGATGTGGAAAGAAATGGTGAGGGGAAGGCTTATGATTCAGAACCCCAAACTCCACATTCTGTTCTGAAAATGGGATTAAGGGAGCGTAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCGCAATGCATTGAGCAGCTGCGTCAGGGCTCATCTTCTGCACAAGAGAAAGAATATTCCTTGAAACAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCTGTTGGATCTCACTCTCAGGCTGTTCCAGTACTAGTTTCTCTTCTCCGGTCAGGACCATTGAGTGTGAAGATACAGGCAGCCACTGTTTTGGGTTCCCTTTGTAAAGAAAATGAGCTGAGGGTGAAAGTTTTACTTGGAGGATGCATTCCTCCATTACTTGGTTTGCTCAAGTCCAATTCAGCTGAAGGTCAAGTTGCTGCTGCAAAAACTATTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTTGGATCAAAAATTTTTTCAACTGAAGGCGTTGTACCAGTGCTTTGGGAGAAGCTTCAGAAGGGGCTGAAGGCAGGAAATGTAGTTGACAATTTATTGACTGGAGCTTTGAAGAATCTTTCCAGCAGTGTTGAGGGATTTTGGAATTCAACAATACAAGCCGGAGGAGTGGACATATTAATGGAGTTACTGAAAACAGGACAGTCTAACACTTTAGCTAATGTTTGCTTTTTACTTGCCTGTATGATGATTGAGGATGCATCTGTTTGTTCAAAGGTGTTGACGGCTGAGACAACCAAACTACTCCTCAAACTATTAGGCCCTGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCTGGTGCATTAAAATCTCTGTCTTCCCAGTGCAAAGAAGCCAGGAGAGAGATTGCTAACTCTAATGGCATTCCTGCCCTAATCAATGCTACAATAGCCCCTTCCAAAGAATTCATGCAGGGAGAGTATGCTCAAGCATTGCAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCCGGTGGTTTATCTTATGTGATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCGCCAACCCAAATTGCTGACACACTAGGGGCCTTAGCTTCGGCTCTCATGATATATGATAATAAGGCAGAATCTACTAGGGCATCAGATCCGTTGGTAGTTGAACAGACATTACTCGCACAATTCAAACCTCGCTCGCCTTTCCTTGTGCAGGAAAGAACCATTGAAGCTCTAGCTAGTTTGTATGGCAATCCAGTACTCTCAGTTAAACTTTCAAATTCTGATGCAAAACGTTTGCTTGTTGGTTTAATAACAATGGCTTCAAATGAGGTCCAAGGTGAGCTTATTAAAGCTCTCTTGACACTATGCAATAATGAAGGCAGTCTATGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCCCTGCTTTGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCACCACTAGTTCAGATTTTGGAGACGGGATCGGCTAAAGCAAAGGAAGATTCAGCAACAATCCTAAGGAACCTGTGCAATCATAGTGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAACGGAAGCTCAAATGGTAAGGAGATTGCAGCAAAGACCCTGAACCACTTAATTCATAAATCTGATACAGCCACTATCAGTCAGCTTACAGCATTATTAACTAGTGATCTACCTGAATCtaaggtttatgttttggatgCTTTGAGAAGTATGCTTTCTGTTGTTCCTCTTAGTGACATTCTACGAGAAGGCAGTGCTGCTAGTGATGCAGTTGATACAATGATTAAGATATTGAACTCTACCAAGGAAGAAACTCAGGCAAAGTCTGCTTCAGCTCTGGCAGGAATTTTTGAGATGAGAAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAACTCTTTTGTCAGCCATGAAGTTGCTCAATGTTGAATCTGATTGTATCCTAATGGAATCTTCACGCTGCATGGCTGCAATATTTCTTTCCATAAAAGAAAACAGGGATGTGGCTGCAGTTGCTAAAGATGCATTATCCCCACTTGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTTGCGGAGCAGGCAACGTGTGCAGTGGCAAATCTTATTTTGGATGGTGAAATTTCTGAAAAAGCTGTTGCAGAAGAAGTTATCTTGCCTGCTACTAGAGTGTTACGTGAAGGCTCAATTTCTGGAAAGACCCTAGCTGCAGCAGCAATTGCTCGCCTATTACGTTCTCGACAAGTTGGTTATGCTATTACTGATTGTGTGAATCGTGCTGGCACTGTCCTTGCTTTGGTTTCTTTCTTAGATTCTGTTGCAAATGGATCTGTTCCTTCATCAGAGGCTCTAGAAGCACTTGCCGTCCTCTCCAGGTCAGAAGAGACCGATGCAAATATTAAACCTGCATGGGCTATTTTGGCTGAATTCCCTGAAAGCATAAGTCCAATTGTCTTATCTATCGCTAATTCAGCACCAAATTTGCAGGATAAAGCAATTCAGATCTTATCCCGATTATGCAGAGATCAGCCTGTTGTTTTAGGAGACACTGTTGCCACTGCCACTGGATGTATAAATTCTATAGCTAAGAGAATCATCAGCTCCAGAAATGTACAGGCCAAAATTGGGGGTGCTGCACTTCTTATTTGTGCTGCCAAAATAAATCATCACAGACTAGTAGAGGATCTCGATCAATCAAATTTGTGTGCCGATCTTGTTCAATCACTTGTTGTGCTTGTTTCAGGACAGCCTTCTCTGGATAATCAGGGTAATGAGAACAAGGAACACATCAGTATATGCAGGCACACAAAAGAAGTGGAGAATGGTGGTGAATCCAATACTGGAACCAACATTGTAAGTGGTGCCAACTTAGCCATATGGTTACTGTCCATTCTAGCTTGTCACGATGAAAAAAGTAAAACAGCAATAATGGAGGCTGGAGCAATTGAGGTTCTCACTGACAGGATCTCAGATTGTTTACAATATACCCAGATTGACTATAAAGAAGATAGCAGCGTGTGGATTTCTGCTTTGTTGTTAGCAATATTATTTCAAGATAGAGATATCATACGAGCACATGCAACCATGAAATCTATACCAGTGCTCGCTAATTTGGTTAAGTCAGAGGAATCTGCAAACAGATATTTTGCTGCACAAGTAATTGCCAGCCTTGTCTGTAATGGTAGCAGGGGAACACTTTTGTCTGTTGCAAATTCTGGGGCAGCAGGTGGACTTATCTCCTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTTTGGAATTGTCAGAAGAATTCTCTTTGGTGCAATATCCTGATCAAGTTGCTCTTGAGAGGTTATTTAGAGTTGATGACATAAGGGTTGGTGCCACTTCTCGGAAGGCTATACCTGCTCTCGTTGATCTTCTCAAGCCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTCTTACACAGCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTTGAATCAGGGGTCTTAGAGGCACTTACAAAGTATCTTTCACTGGGTCCACAAGATGCAACTGAAGAAGCTGCTACTGATCTCTTGGGAATTCTGTTCAGCAGTGCTGAGATACGGAAACATGAGTCAGCATTTGGTGCTGTTACGCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTCACTGCTGACCACATTAGGAATGCAGAGAGTGCTCGCCAAGCTGTTCAGCCCTTGGTGGAGATTCTCAGCACTGGTTTAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGTTACTGAGTGAAAATCCATCAAGAGCACTTGTTGTTGCTGATGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGGTTCTTTCATCAAATTGTTCAATGGACCTAAAAGGGGATGCTGCTGAATTATGTTGTGCTCTGTTTGGAAATACAAGGATCCGATCAACAATGGCCGCTGCACGATGTGTCGAACCTCTAGTTGCTCTCCTTGTGACTGAGTTTAGTCCTGCTCAGCTTTCAGTTGTCCGAGCATTGGATAGGCTTGTTGATGATGAACAACTGGCAGAATTAGTTGCTGCACATGGTGCTGTTATTCCTCTTGTTGGGCTACTTTATGGTAGGAATTATGTGCTTCACGAGGCAACTTCCAGAGCTTTGGTTAAGTTAGGGAAAGACAGGCCTGCTTGTAAGATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACATCCTTCATGATGCACCTGATTATCTATGTGCGGCTTTTGCAGAGTTGCTGCGCATATTAACCAATAATGCTAGCATAGCTAAAGGACCTTCTGCTGCCAAAGTGGTTGAACCATTATTTTTGTTGCTGACAAAACAAGACTTTGGACCTGATGGACAGCATAGTGCACTTCAGGTTTTGGTTAATATTTTAGAACATCCACAGTGTCGTGCGGACTATAAATTGACTTCTCACCAAGCTATTGAACCACTTGTCCCATTGCTTGATTCTCCAATACCAGCCGTGCAACAGTTGGCTGCTGAGCTTCTTTCAAATCTACTTCTAGAAGAACACCTTCAGAAAGATCCAGTGACGCATCAAGTAATTGGTCCTCTTATACGAGTTCTTGGTTCTGGTATACACATACTGCAGCAAAGAGCTATGAAGGCCCTAGTTAGCATTGCACTGACATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTCATAGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCCCATGCATTATGGGAGTCAGCTGCCTCAGTTCTGTCAAGTATTCTGCAATTTAGTTCTGAATTTTACTTGGAGGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGCTCTGGCTCAGAGAGCACAGTTATTGGTGCATTAAATGCTCTTCTGGTGTTGGAAAGTGATGATGGAACTAGTGCCGAAGCAATGGCTGAAAGTGGTGCCATTGAGGCTCTCTTGGAGCTTCTAAGATCTCATCAGTGTGAAGAAATTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTGAAGATCAGAGAAACAAAAGTTACTAAATCGGCCATCTTGCCATTATCCCAATACCTCTTGGATCCACAAACACAAGCGCAGCAGGCAAGATTACTGGCAACTTTGGCTCTTGGTGATCTATTTCAGAATGAGGGTCTTGCTCGGACAACTGATGCAGTTTCAGCTTGTCGGGCTTTAGTGAATGTGCTTGAGGAACAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTAATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTATACTGGATCTTATAGGTTCAAGTGAGCCAGAAACGTCTGTTCAGGCCGCAATGTTTGTTAAACTTCTCTTCTCTAATCATACTATTCAAGAGTATGCTTCTAGTGAAACTGTAAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCCACCGGAACTGTGAACGAAGAGTATCTGAAAGCTTTAAATTCTCTGTTTAGCAACTTTCCACGACTGAGAGCAACTGAGCCAGCAACACTAAGCATTCCCCATCTGGTCACTtccttaaagacaggatcagAGGCCACTCAGGAAGCTGCCTTGGATGCCCTTTTTCTGCTGAGACAAGCTTGGTCGGCATGCCCAGCTGAAGTTTCAAGAGCTCAGTCAATAGCTGCTGCTGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCTGGCCCGCCTCGGTTTCAGGAGAAGGCAGAGTTTTTATTGCAGTGTTTGCCAGGGACATTGGTTGTGATCATCAAGCGTGGTAACAATATGAAGCAGTCAGTTGGAAACCCGAGTGTTTACTGTAAGCTAACACTTGGCAACACTCCTCCAAGGCAAACCCAGGTGGTCTCGACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAGGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGAGTGGTAATGCTGGGAGCAGTCGCCGGAGAGTACACTTTATTGCCGCAAAGTAAAAGTGGCCCTTCAAGGAATTTGGAAATAGAATTTCAATGGTCTAACAAATGA 6450 0.4324 LATTLAWRSAASNGSSLTANDVERNGEGKAYDSEPQTPHSVLKMGLRERSSSMEDPDGTLASVAQCIEQLRQGSSSAQEKEYSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGPLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSNSAEGQVAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEKLQKGLKAGNVVDNLLTGALKNLSSSVEGFWNSTIQAGGVDILMELLKTGQSNTLANVCFLLACMMIEDASVCSKVLTAETTKLLLKLLGPGNDAPVRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLAQFKPRSPFLVQERTIEALASLYGNPVLSVKLSNSDAKRLLVGLITMASNEVQGELIKALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVPLSDILREGSAASDAVDTMIKILNSTKEETQAKSASALAGIFEMRKDVRESSIAVKTLLSAMKLLNVESDCILMESSRCMAAIFLSIKENRDVAAVAKDALSPLVALANSSVLEVAEQATCAVANLILDGEISEKAVAEEVILPATRVLREGSISGKTLAAAAIARLLRSRQVGYAITDCVNRAGTVLALVSFLDSVANGSVPSSEALEALAVLSRSEETDANIKPAWAILAEFPESISPIVLSIANSAPNLQDKAIQILSRLCRDQPVVLGDTVATATGCINSIAKRIISSRNVQAKIGGAALLICAAKINHHRLVEDLDQSNLCADLVQSLVVLVSGQPSLDNQGNENKEHISICRHTKEVENGGESNTGTNIVSGANLAIWLLSILACHDEKSKTAIMEAGAIEVLTDRISDCLQYTQIDYKEDSSVWISALLLAILFQDRDIIRAHATMKSIPVLANLVKSEESANRYFAAQVIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVQYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGVLEALTKYLSLGPQDATEEAATDLLGILFSSAEIRKHESAFGAVTQLVAVLRLGGRGARYSAAKALESLFTADHIRNAESARQAVQPLVEILSTGLEREQHAAIAALVRLLSENPSRALVVADVEMNAVDVLCRVLSSNCSMDLKGDAAELCCALFGNTRIRSTMAAARCVEPLVALLVTEFSPAQLSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEATSRALVKLGKDRPACKMEMVKAGVIESILDILHDAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTKQDFGPDGQHSALQVLVNILEHPQCRADYKLTSHQAIEPLVPLLDSPIPAVQQLAAELLSNLLLEEHLQKDPVTHQVIGPLIRVLGSGIHILQQRAMKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEEIAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTTDAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSEPETSVQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGAVAGEYTLLPQSKSGPSRNLEIEFQWSNK 2149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0394 2149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2028 2136 IPR035892 -
Sto4g0394 2149 SMART C2_3c 2029 2125 IPR000008 -
Sto4g0394 2149 SUPERFAMILY ARM repeat 619 1158 IPR016024 -
Sto4g0394 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1576 1603 IPR000225 GO:0005515
Sto4g0394 2149 Coils Coil 297 324 - -
Sto4g0394 2149 Gene3D - 1800 2026 IPR011989 -
Sto4g0394 2149 Pfam C2 domain 2028 2119 IPR000008 -
Sto4g0394 2149 ProSiteProfiles C2 domain profile. 2009 2126 IPR000008 -
Sto4g0394 2149 Coils Coil 2148 2149 - -
Sto4g0394 2149 Gene3D - 820 1179 IPR011989 -
Sto4g0394 2149 Pfam Armadillo/beta-catenin-like repeat 525 564 IPR000225 GO:0005515
Sto4g0394 2149 CDD C2 2030 2120 - -
Sto4g0394 2149 SMART arm_5 1437 1477 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 525 565 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 94 135 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 567 607 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1563 1605 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1309 1350 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1396 1436 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1182 1225 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 268 309 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 311 360 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1855 1895 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 136 176 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1479 1519 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1728 1767 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 733 771 IPR000225 GO:0005515
Sto4g0394 2149 SMART arm_5 1227 1268 IPR000225 GO:0005515
Sto4g0394 2149 Gene3D - 1678 1799 IPR011989 -
Sto4g0394 2149 Gene3D - 48 412 IPR011989 -
Sto4g0394 2149 Gene3D - 1314 1672 IPR011989 -
Sto4g0394 2149 Gene3D - 413 652 IPR011989 -
Sto4g0394 2149 Gene3D - 653 819 IPR011989 -
Sto4g0394 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1194 1238 IPR000225 GO:0005515
Sto4g0394 2149 SUPERFAMILY ARM repeat 57 643 IPR016024 -
Sto4g0394 2149 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2149 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Sto4g0394 2149 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 536 578 IPR000225 GO:0005515
Sto4g0394 2149 Gene3D C2 domain 2027 2149 IPR035892 -
Sto4g0394 2149 SUPERFAMILY ARM repeat 1578 2026 IPR016024 -
Sto4g0394 2149 Gene3D - 1180 1297 IPR011989 -
Sto4g0394 2149 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2149 - -
Sto4g0394 2149 SUPERFAMILY ARM repeat 1176 1361 IPR016024 -
Sto4g0394 2149 MobiDBLite consensus disorder prediction 13 39 - -
Sto4g0394 2149 SUPERFAMILY ARM repeat 1319 1652 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0394 Sto-Chr4 3069291 3078179 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0394 457 634 U-box Gene Family AT3G46510 29.348 2.94e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0394 - - gmx:100816765 3611.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0394 4 3069291 3078179 Sto4g0394 4 3069291 3078179 ECH