Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0390 ATGCATTGCTCGCATTTTGCTATCTGGAGAGGAGCTGGGTTCTGGACTGGACTGATCTGCTTGGGAGTTCCAAGTGAAGCAAAGCTGGCGACTACACTGGCTTGGAGGTCGGCTGCCAGCAATGGCAGCAGCCTTACTGCTAATGATGTGGAAAGAAATGGTGAGGGGAAGGCTTATGATTCAGAACCCCAAACTCCACATTCTGTTCTGAAAATGGGATTAAGGGAGCGTAGCAGCAGCATGGAGGATCCAGATGGGACATTAGCAAGTGTTGCGCAATGCATTGAGCAGCTGCGTCAGGGCTCATCTTCTGCACAAGAGAAAGAATATTCCTTGAAACAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCTGTTGGATCTCACTCTCAGGCTGTTCCAGTACTAGTTTCTCTTCTCCGGTCAGGACCATTGAGTGTGAAGATACAGGCAGCCACTGTTTTGGGTTCCCTTTGTAAAGAAAATGAGCTGAGGGTGAAAGTTTTACTTGGAGGATGCATTCCTCCATTACTTGGTTTGCTCAAGTCCAATTCAGCTGAAGGTCAAGTTGCTGCTGCAAAAACTATTTATGCTGTCTCTCAAGGTGGTGTAAAAGATCATGTCGGATCAAAAATTTTTTCAACTGAAGGTGTTGTACCAGTGCTTTGGGAGAAGCTTCAGAAGGGGCTGAAGGCAGGAAATGTAGTTGACAATTTATTGACTGGAGCTTTGAAGAATCTTTCCAGCAGTGTTGAGGGATTTTGGAATTCAACAATACAAGCCGGAGGAGTGGACATTTTAATGGAGTTACTGAAAACAGGACAGTCTAACACTTTAGCTAATGTTTGCTTTTTACTTGCCTGTATGATGATTGAGGATGCATCTGTTTGTTCAAAGGTGTTGACGGCTGAGACAACCAAACTACTCCTCAAACTATTAGGCCCTGGTAATGATGCCCCTGTTAGAGCTGAAGCAGCTGGTGCATTAAAATCTCTGTCTTCCCAGTGCAAAGAAGCCAGGAGAGAGATTGCTAACTCTAATGGCATTCCTGCCCTAATCAATGCTACAATAGCCCCTTCCAAAGAATTCATGCAGGGAGAGTATGCTCAAGCATTGCAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCCGGTGGTTTATCTTATGTGATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCGCCAACCCAAATTGCTGACACACTAGGGGCCTTAGCTTCGGCTCTCATGATATATGATAATAAGGCAGAATCTACTAGGGCATCAGATCCGTTGGTAGTTGAACAGACATTACTCGCACAATTCAAACCTCGTTCGCCCTTCCTTGTGCAGGAAAGAACCATTGAAGCTCTAGCTAGTTTGTATGGCAATCCAGTACTCTCAGTTAAACTTTCAAATTCTGATGCAAAACGTTTGCTTGTTGGTTTAATAACAATGGCTTCAAATGAGGTCCAAGGTGAGCTTATTAAAGCTCTCTTGACACTATGCAATAATGAAGCCAGTCTATGGCATGCACTTCAAGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTCTGGGGCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCCCTGCTTTGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCACCACTAGTTCAGATTTTGGAGACGGGATCGGCTAAAGCAAAGGAAGATTCAGCAACAATCCTAAGGAACCTGTGCAATCATAGTGAAGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTATTGAAGAACGGAAGCTCAAATGGGAAGGAGATTGCAGCAAAGACCCTGAACCACTTAATTCATAAATCTGATACAGCCACTATCAGTCAGCTTACAGCATTATTAACTAGTGATCTACCTGAATctatggtttatgttttggatgCTTTGAGAAGTATGCTTTCTGTTGTTCCTCTTAGTGACATTCTACGAGAAGGCAGTGCTGCCAGTGATGCAGTTGATACAATGATTAAGATATTGAACTCTACCACGGAAGAAACTCAGGCAAATTCTGCTTCAGCTCTGGCAGGAATTTTTGAGATGAGAAAAGATGTGCGTGAAAGTAGCATTGCTGTTAAAACTCTTTTGTCAGCCATGAAGTTGCTCAATGTTGAATCTGATTGTATCCTAATGGAATCTTCACGCTGCATGGCTGCAATATTTCTTTCCATAAAAGAAAACAGGGATGTGGCTGCAGTTGCTAAAGATGCATTATCCTCACTTGTTGCACTAGCTAACTCTTCAGTTTTGGAAGTTGCGGAGCAGGCAACGTGTGCAGTGGCAAATCTTATTTTGGATGGTGAAATTTCTGAAAACGCTGTTGCAGAAGAAGTTATCTTGCCTGCTACTAGAGTGTTACGTGAAGGCTCAATTTCTGGAAAGACCCTAGCTGCAGCAGCAATTGCTCGCCTATTACGTTCTCGACAAGTTGATTATGCTATTACTGATTGTGTGAATCGTGCTGGCACTGTCCTTGCTTTGGTTTCTTTCTTAGATTCTGTTGCAAATGGATCTGTTCCTTCATCAGAGGCTCTAGAAGCACTTGCCGTCCTCTCCAGGTCAGATGAGACCGGTGCAAATATTAAACCTGCATGGGCTATTTTGGCTGAATTCCCTGAAAGCATAAGTCCAATAGTCTTATCTATCGCTGATTCAGCACCAAATTTGCAGGATAAAGCTATTCAGATCTTATCCCGATTATGCAGAGATCAGCCTGTTGTTTTAGGAGACACTGTTGCCACTGCCACTGGATGTATAAATTCTATAACTAAGAGAATCATCAGCTCCAGAAATGTACAGGCCAAAATTGGGGGTGCTGCACTTCTTATTTGTGCTGCCAAAATAAATCATCACAGACTAGTAGAGGATCTCGATCAATCAAATTTGTGTGCCGATCTTGTTCAGTCACTTGTTGTGCTTGTTTCGGGACAGCCTTCTCTGAATAATCAGGGTAATGAGAACAAGGAACTCATCAGTATACGCAGGCACACAAAAGAAGTGGAGAATGGTGGTGAATCCAATACCGGAACCAACATTGTAAGTGGTGCCAACTTAGCCATATGGTTACTGTCCATTCTAGCTTGTCACGATGAAAAAAGTAAAACAGCAATAATGGAGGCTGGAGCAATTGAGGTTCTCACTGACAGGATCTCAGATTGTTTACAATATACCCAGATTGACTATAAAGAAGATAGCAGCATGTGGATCTCTGCTTTGTTGTTAGCAATATTATTTCAAGATAGAGATATCATACGAGCACATGCAACCATGAAATCTATACCAGTGCTCGCTAATTTGGTTAAGTCAGAGGAATCTGCAAACAGATATTTTGCTGCACAAGTAATTGCAAGCCTTGTCTGTAATGGTAGCAGGGGAACACTTTTGTCTGTTGCAAATTCTGGGGCAGCAGGTGGACTTATCTCCTTGCTTGGCTGTGCTGATACTGATATACAGGATCTTTTGGAATTGTCAGAAGAATTCTCTTTGGTGCAATATCCTGATCAAGTTGCTCTTGAGAGGTTATTTAGAGTTGATGACATAAGGGTTGGTGCCACTTCTCGGAAGGCTATACCTGCTCTCGTTGATCTTCTCAAGCCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTCTTACACAGCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTTGAATCAGGGGTCTTAGAGGCACTTACGAAGTATCTTTCACTGGGTCCACAAGATGCAACTGAAGAAGCTGCTACTGATCTCTTGGGAATTCTGTTCAGCAGTGCTGAGATACGGAAACATGAGTCAGCATTTGGTGCTGTTACGCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTGTTCACTGCTGACCACATTAGGAATGCAGAGAGTGCTCGCCAAGCTGTTCAGCCCTTGGTGGAGATTCTCAGCACTGGTTTAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTAGGTTACTGAGTGAAAATCCATCAAGAGCACTTGTTGTTGCTGATGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGGTTCTTTCATCAAATTGTTCAATGGACCTAAAAGGGGATGCTGCTGAATTATGTTGTGCTCTGTTTGGAAATACAAGGATCCGATCAACAATGGCCGCTGCACGATGTGTCGAACCTCTAGTTGCTCTCCTTGTGACTGAGTTTAGTCCTGCTCAGCTTTCAGTTGTCCGAGCATTGGATAGGCTTGTTGATGATGAACACCTGGCAGAGTTAGTTGCTGCACATGGTGCTGTTATTCCTCTTGTTGGGCTACTTTATGGTAGGAATTATGTGCTTCACGAGGCAACTTCCAGAGCTTTGGTTAAGTTAGGGAAAGACAGGCTTGCTTGTAAGATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACATCCTTCATGATGCACCTGATTATCTATGTGCGGCTTTTGCAGAGTTGCTGCGCATATTAACCAATAATGCTAGCATAGCTAAAGGACCTTCTGCTGCCAAAGTGGTTGAAccattatttttgttgttgacAAAACAAGACTTTGGACCTGATGGACAGCATAGTGCACTTCAGGTTTTGGTTAATATTTTAGAACATCCACAGTGTCGTGCGGACTATAAATTGACTTCTCACCAAGCTATTGAACCACTTGTCCCATTGCTTGATTCTCCAATACCAGCCGTGCAACAGTTGGCTGCTGAGCTTCTGTCAAATCTACTTCTAGAAGAACACCTTCAGAAAGATCCAGTGACGCATCAAGTAATTGGTCCTCTTATACGAGTTCTTGGTTCTGGTATACACATACTGCAGCAAAGAGCTATGAAGGCCCTAGTTAGCATTGCATTGACATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTCATAGAAATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCCCATGCATTATGGGAGTCAGCTGCCTCAGTTCTGTCAAGTATTCTGCAATTTAGTTCTGAATTTTACTTGGAGGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGCTCTGGCTCAGAGAGCACAGTTATTGGTGCATTAAATGCTCTTCTGGTGTTGGAAAGTGATGATGGAACTAGTGCCGAAGCAATGGCTGAAAGTGGTGCCATTGAGGCTCTCTTGGAGCTTCTAAGATCTCATCAGTGTGAAGAAATTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTGAAGATTAGAGAAACAAAAGTTACTAAATCGGCCATCTTGCCATTATCCCAATACCTCTTGGATCCACAAACACAAGCGCAGCAGGCAAGATTACTGGCAACTTTGGCTCTTGGTGATCTATTTCAGAATGAGGGTCTTGCTCGGACAACTGATGCAGTTTCAGCTTGTCGGGCTTTAGTGAATGTGCTTGAGGAACAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTAATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTATACTGGATCTTATAGGTTCAAGTGAGCCAGAAACGTCTGTTCAGGCCGCAATGTTTGTTAAACTTCTCTTCTCTAATCATACTATTCAAGAGTATGCTTCTAGTGAAACTGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCCACCGGAACTGTGAACGAAGAGTATCTGAAAGCTTTAAATTCTCTGTTTAGCAACTTTCCACGACTGAGAGCAACTGAGCCAGCAACACTAAGCATTCCCCATCTGGTCACTtccttaaagacaggatcagAGGCCACTCAGGAAGCTGCCTTGGATGCCCTTTTTCTGCTGAGACAAGCTTGGTCGGCGTGCCCAGCTGAAGTTTCAAGAGCTCAGTCAATAGCTGCTGCTGATGCTATTCCTTTGCTGCAGTACTTAATCCAGTCTGGCCCGCCTCGGTTTCAGGAGAAGGCAGAGTTTTTATTGCAGTGTTTGCCAGGGACATTGGTTGTGATCATCAAGCGTGGTAACAATATGAAGCAGTCAGTTGGAAACCCGAGTGTTTACTGTAAGCTAACACTTGGCAACACTCCTCCAAGGCAAACCCAGGTGGTCTCGACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAGGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGAGTGGTAATGCTGGGAGCAGTCGCCGGAGAGTACACCCTATTGCCGCAAAGTAAAAGTGGTCCTTCAAGGAATTTGGAAATAGAATTTCAATGGTCTAACAAATGA 6534 0.4331 MHCSHFAIWRGAGFWTGLICLGVPSEAKLATTLAWRSAASNGSSLTANDVERNGEGKAYDSEPQTPHSVLKMGLRERSSSMEDPDGTLASVAQCIEQLRQGSSSAQEKEYSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGPLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSNSAEGQVAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEKLQKGLKAGNVVDNLLTGALKNLSSSVEGFWNSTIQAGGVDILMELLKTGQSNTLANVCFLLACMMIEDASVCSKVLTAETTKLLLKLLGPGNDAPVRAEAAGALKSLSSQCKEARREIANSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNKAESTRASDPLVVEQTLLAQFKPRSPFLVQERTIEALASLYGNPVLSVKLSNSDAKRLLVGLITMASNEVQGELIKALLTLCNNEASLWHALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSSNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESMVYVLDALRSMLSVVPLSDILREGSAASDAVDTMIKILNSTTEETQANSASALAGIFEMRKDVRESSIAVKTLLSAMKLLNVESDCILMESSRCMAAIFLSIKENRDVAAVAKDALSSLVALANSSVLEVAEQATCAVANLILDGEISENAVAEEVILPATRVLREGSISGKTLAAAAIARLLRSRQVDYAITDCVNRAGTVLALVSFLDSVANGSVPSSEALEALAVLSRSDETGANIKPAWAILAEFPESISPIVLSIADSAPNLQDKAIQILSRLCRDQPVVLGDTVATATGCINSITKRIISSRNVQAKIGGAALLICAAKINHHRLVEDLDQSNLCADLVQSLVVLVSGQPSLNNQGNENKELISIRRHTKEVENGGESNTGTNIVSGANLAIWLLSILACHDEKSKTAIMEAGAIEVLTDRISDCLQYTQIDYKEDSSMWISALLLAILFQDRDIIRAHATMKSIPVLANLVKSEESANRYFAAQVIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLELSEEFSLVQYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGVLEALTKYLSLGPQDATEEAATDLLGILFSSAEIRKHESAFGAVTQLVAVLRLGGRGARYSAAKALESLFTADHIRNAESARQAVQPLVEILSTGLEREQHAAIAALVRLLSENPSRALVVADVEMNAVDVLCRVLSSNCSMDLKGDAAELCCALFGNTRIRSTMAAARCVEPLVALLVTEFSPAQLSVVRALDRLVDDEHLAELVAAHGAVIPLVGLLYGRNYVLHEATSRALVKLGKDRLACKMEMVKAGVIESILDILHDAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTKQDFGPDGQHSALQVLVNILEHPQCRADYKLTSHQAIEPLVPLLDSPIPAVQQLAAELLSNLLLEEHLQKDPVTHQVIGPLIRVLGSGIHILQQRAMKALVSIALTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEEIAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTTDAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSEPETSVQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTQVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGAVAGEYTLLPQSKSGPSRNLEIEFQWSNK 2177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0390 2177 Gene3D C2 domain 2056 2177 IPR035892 -
Sto4g0390 2177 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1222 1266 IPR000225 GO:0005515
Sto4g0390 2177 SUPERFAMILY ARM repeat 85 670 IPR016024 -
Sto4g0390 2177 SUPERFAMILY ARM repeat 687 995 IPR016024 -
Sto4g0390 2177 Gene3D - 677 846 IPR011989 -
Sto4g0390 2177 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2056 2164 IPR035892 -
Sto4g0390 2177 SMART C2_3c 2057 2153 IPR000008 -
Sto4g0390 2177 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 47 2177 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Sto4g0390 2177 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 47 2177 - -
Sto4g0390 2177 SUPERFAMILY ARM repeat 1052 1185 IPR016024 -
Sto4g0390 2177 Pfam C2 domain 2056 2147 IPR000008 -
Sto4g0390 2177 SMART arm_5 1210 1253 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 296 337 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1883 1923 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 122 163 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 339 388 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1756 1795 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1337 1378 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 164 204 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1424 1464 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1591 1633 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 761 799 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1255 1296 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1465 1505 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 1506 1547 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 553 593 IPR000225 GO:0005515
Sto4g0390 2177 SMART arm_5 595 635 IPR000225 GO:0005515
Sto4g0390 2177 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 564 606 IPR000225 GO:0005515
Sto4g0390 2177 Gene3D - 847 1207 IPR011989 -
Sto4g0390 2177 ProSiteProfiles C2 domain profile. 2037 2154 IPR000008 -
Sto4g0390 2177 Coils Coil 325 352 - -
Sto4g0390 2177 SUPERFAMILY ARM repeat 1606 2054 IPR016024 -
Sto4g0390 2177 SUPERFAMILY ARM repeat 1212 1594 IPR016024 -
Sto4g0390 2177 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1604 1631 IPR000225 GO:0005515
Sto4g0390 2177 Gene3D - 1208 1447 IPR011989 -
Sto4g0390 2177 Pfam Armadillo/beta-catenin-like repeat 553 592 IPR000225 GO:0005515
Sto4g0390 2177 MobiDBLite consensus disorder prediction 44 66 - -
Sto4g0390 2177 Gene3D - 1464 1682 IPR011989 -
Sto4g0390 2177 CDD C2 2058 2148 - -
Sto4g0390 2177 Gene3D - 76 436 IPR011989 -
Sto4g0390 2177 Gene3D - 437 676 IPR011989 -
Sto4g0390 2177 Gene3D - 1683 2055 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0390 Sto-Chr4 3047721 3057029 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0390 524 709 U-box Gene Family AT3G46510 34.343 6.50e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0390 - - gmx:100816765 3603.91