Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0381 ATGGCGGATCACTCAGACACTTCGCCTCTAATCCCTCCTCCACCGATCCCTGAACCTGGAGAGATCGACCTTGAGGCAGGTCCCTGCGAACAAATTCAATGCCGGATTTGTCTCGAAACTGATGGTAGTAGAGATTTCATAGCTCCTTGCAAGTGTAAAGGCACATCAAAATATGTACATCGTGAATGTTTGGATCACTGGCGAGCCATTAAGGAAGGGTTTGCATTTGCTCACTGTACAACCTGCAAGGCTCCTTATCATTTGCGAGTTCATGTTGCTGCTGATAGGAAATGGCGAACTTTGAAATTTCGATTCTTTGTTACCAGAGacattttgtttatatttttagcTGTCCAGCTTGTCATTGGTTCACTGGCTTATTTGGTTTATCTAGTTGATCGTTTCCAGCATTACTGGCTTCGTCTTGTCTGGGGTTTTGATAATGAGCTTAGCTTTTACTACATATGTGGAGCTCTATTGTTTTTTGCCTTGCTTGGCCTATCTGGATGCTTCATTACTTGTTATGATCGAAGGGTTCGCAATGATTTGGCACAGCCCTGTCGAGAATTATGTCTTTGTTGCTGTCAACCTGGAATTTGTGCAGACTGTCATTTGCCGGGCACTCTTTGCATGTGGACAGATTGCACCACATGCTTTGAGAGTTGTGGAACTATGGCCACTGAATGTGGTGGTTGCTTGGGAGGTGCTGAGGAAGCAGGGCTGCCCTTATTATTCATATTGGCTTTGATTGTTCTGGGACTTTTTACTATAATAGGGATATTTTACAGCGTACTTGTGGCTACTATGGTAGGACAACGGATATGGCAGCGACATTATCATATTCTTGCAAAACGGATGTTAACAAAGGAGTATGTGGTTGAGGATGTTGATGGGGAGATTACAGGGCCTGATTGGTCTCCCCCATCTCTCCCTCCCGAGCATGTTCAACAGCTGAAAACACTGGGCCTCTTATGA 975 0.441 MADHSDTSPLIPPPPIPEPGEIDLEAGPCEQIQCRICLETDGSRDFIAPCKCKGTSKYVHRECLDHWRAIKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILFIFLAVQLVIGSLAYLVYLVDRFQHYWLRLVWGFDNELSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGICADCHLPGTLCMWTDCTTCFESCGTMATECGGCLGGAEEAGLPLLFILALIVLGLFTIIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEITGPDWSPPSLPPEHVQQLKTLGLL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0381 324 ProSiteProfiles Zinc finger RING-CH-type profile. 26 89 IPR011016 GO:0008270
Sto4g0381 324 PANTHER BNAA04G12620D PROTEIN 1 324 - -
Sto4g0381 324 SUPERFAMILY RING/U-box 29 87 - -
Sto4g0381 324 Pfam RING-variant domain 34 82 IPR011016 GO:0008270
Sto4g0381 324 SMART ringv_2 33 83 IPR011016 GO:0008270
Sto4g0381 324 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 324 - -
Sto4g0381 324 CDD RING_CH-C4HC3_MARCH 34 83 - -
Sto4g0381 324 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 97 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0381 Sto-Chr4 2973216 2977184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0381 1 324 C3H Transcription Factor Family AT2G22120 83.385 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0381 - - gmx:100791777 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0381 4 2973216 2977184 Sto4g0381 4 2973216 2977184 ECH