Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0348 ATGAATCATGGTGGTTTGTTTGAGGATCATCATCATGATCATGAGGATCATGAGATGGGTGTAGAAGCCATACTAGCAGCAGCTTCTACTCAAAAGCCAAGAGTACTACTACAAGACAACCTccatggaggaggaggaggagcaacACAACTCCTTTCCTTGCATAGGGGATGGGGGGGATCATCAGAAGTGAGTGATGAGTATTGGTTGAGTGGTAGTAGTAAAAGACTTAGTGGAGAGAGTCATGGACAGCTAGGGATTTGtgggatgaagatgaagaagataaaGGGAAGGAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGTGATGTTGATGTCTTGGATGATGGCTACAAATGGAGGAAATATGGTCAGAAGGATAACTGTCGGGTAAAGAAACGGGTGGAGCGTTTGGCGGAGGATCCGAGGATGGTGATAACAACGTATGAAGGCAGACATGTTCATTCTCCTTCTAAtgatctagaagattctcaacctCCTTCTCAGCTTACCAATTTCTTGTGGTag 537 0.3911 MNHGGLFEDHHHDHEDHEMGVEAILAAASTQKPRVLLQDNLHGGGGGATQLLSLHRGWGGSSEVSDEYWLSGSSKRLSGESHGQLGICGMKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQPPSQLTNFLW 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0348 178 Gene3D WRKY domain 104 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto4g0348 178 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 167 IPR044810 GO:0003700
Sto4g0348 178 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 129 IPR044810 GO:0003700
Sto4g0348 178 Gene3D WRKY domain 131 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto4g0348 178 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 63 129 - -
Sto4g0348 178 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 129 167 - -
Sto4g0348 178 SUPERFAMILY WRKY DNA-binding domain 109 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto4g0348 178 SMART WRKY_cls 117 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto4g0348 178 MobiDBLite consensus disorder prediction 154 174 - -
Sto4g0348 178 Pfam WRKY DNA -binding domain 130 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto4g0348 178 ProSiteProfiles WRKY domain profile. 112 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0348 Sto-Chr4 2703890 2705514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0348 87 178 WRKY Transcription Factor Family AT4G39410 62.609 1.17e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto4g0348 WRKY 5.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0348 - - gmx:100127389 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0348 4 2703890 2705514 Sto4g0348 4 2703890 2705514 ECH