Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0328 atggCGAAATCACCTGAATGTGAGCATCCACAAAAGGCTTCTGGTTGGGCTGCTAGGGATACTTCGGGCCATCTTTCTCCCTTTCCCTTCTCTCGAAGGGAAGTTGGTGCTGATGATGTCGCTGTGAAAATTCTATTCTGTGGGGTTTGTCATTCGGATCTGCATACTGCAAAGAACGAATGGGGTTTCACAACTTACCCTGTCGTTCCTGGGCATGAAATTGTTGGTGTTGTGACAAAAACTGGGGATAACGTCAAAAAGTTCAAAGTGGGTGACAAAGTTGGAGTTGGTGTCATAGTGGACTCCTGCAAGAAATGTGATATTTGCGAGCAAGACCTGGAGAATTACTGTCCTCGGACTGTATTTACCTACAACTCTCCTGGCTTTGATGGGACAAGAACCTATGGTGGCTATTCTGATTTTGTGGTTGTTCACGAGCGCTTTGTGCTCAGATTTCCTGAGAATCTACCCCTTGATGCTGGTGCTCCGCTTCTCTGTGCTGGGATTACTGTGTACAGTCCAATGAAATATTATGGAATGACGGAGGCAGGTAAACATTTGGGAGTGGCAGGGCTTGGCGGGTTAGGTCATATTGCTGTGAAAATTGGTAAGGCCTTTGGGCTGAAAGTTACCGTCATTAGCACCTCTCAGAAAAAGGAAGATGAGGCCATTAACAAACTTGGAGCTGATGCTTTCCTTGTTTCCTCTGACCCTGGAAAAGTGAAGGCAGCTATGAACAGCATGGACTTCATCATAGACACAATTTCTGCTGTTCATTCCCTTGTTCCACTGCTTGGTCTACTGAAGATGAACGGGAAGCTGATCACTGTGGGGTTGCCAAACAAGCCCTTAGAGCTCCCTATCTTTTCTTTAGTTGCAGCACGGAAGCTTGTGGGGGGAAGTGACATTGGAGGGATGAAAGAGACACAAGAGATGCTTGACTTTTGTGGAAAGCACAATATTACTGCAGAGATTGAGTTGATTAAGATGGACCAAATCAATACTGCAATGGAAAGGCTTGCCAAATCTGATGTGAAATATCGGTTTGTGATCGATGTGGCAAACTCCTTTTCAGAGTAG 1080 0.4537 MAKSPECEHPQKASGWAARDTSGHLSPFPFSRREVGADDVAVKILFCGVCHSDLHTAKNEWGFTTYPVVPGHEIVGVVTKTGDNVKKFKVGDKVGVGVIVDSCKKCDICEQDLENYCPRTVFTYNSPGFDGTRTYGGYSDFVVVHERFVLRFPENLPLDAGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLGHIAVKIGKAFGLKVTVISTSQKKEDEAINKLGADAFLVSSDPGKVKAAMNSMDFIIDTISAVHSLVPLLGLLKMNGKLITVGLPNKPLELPIFSLVAARKLVGGSDIGGMKETQEMLDFCGKHNITAEIELIKMDQINTAMERLAKSDVKYRFVIDVANSFSE 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0328 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 357 - -
Sto4g0328 359 PANTHER ALDEHYDE REDUCTASE 11 357 - -
Sto4g0328 359 MobiDBLite consensus disorder prediction 1 20 - -
Sto4g0328 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Sto4g0328 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Sto4g0328 359 SMART PKS_ER_names_mod 20 351 IPR020843 GO:0016491
Sto4g0328 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Sto4g0328 359 Gene3D - 16 353 - -
Sto4g0328 359 SUPERFAMILY GroES-like 21 185 IPR011032 -
Sto4g0328 359 Gene3D - 167 323 - -
Sto4g0328 359 CDD CAD1 15 352 - -
Sto4g0328 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0328 Sto-Chr4 2568399 2571165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0328 11 357 Monolignol Biosynthesis Gene Families AT2G21730 72.206 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0328 K00083 - gmx:100819684 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0328 4 2568399 2571165 Sto4g0328 4 2568399 2571165 ECH