Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0323 ATGCTTCAGCAACTCTCCACTTTACCGGAAACTTCTGGAGCTTCCATTCATCCCGACGATGGAAGAGGAGGGTGTAGTGGGCCGGACTCTGATGGGCCCAAAGACCATCATCATGGGCTCGCCGGCGAGGAGGCAGACCGCAATTCCACCGCCAACCGGTGGCCTCGAGAGGAGACAATGGCGTTGCTCAAGATAAGATCGGAGATGGACGTTGCCTTCAGAGACACAACCCCCAAAGCTCCTCTTTGGCAACAAATTTCAAGGAGATTAGGTGAGCTAGGTTATCATAGGAGTGCCAAGAAATGCAAGGAGAAGTTTGAGAACATTTACAAGTACCACAGGAGGACCAAAGATGGGCGTTATGGGAAACCCAATAGCAAGACCTATCGTTTCTTTGAGCAATTAGAAGCTCTTCAAACCCCGCATCCTCCTCATGAACAAGAACAACCCACTACTCTTGTTCAACATGCCGTGCCCTGCTCTATTAGATTCCCTACTAGTGCAGATTATAGCGATTCCACCACTTCCTCTAATACCAAAGATTCTGCAGAAGCAGCTACTACAACTCCAAAGAGTGATAAGAGGAGGCTCACACAGTTCTTCGAGAGGTTGATGAAGGAGGTGGTGGAGAAGCAGGAGAGTTTACACAGGAAGTTCATGGAGGTGCTAGAGAAATGTGAACAAGATCGAATAGCAAGAGATGAAGCATGGAAGATGCAAGAGTTAGCTCGGATTAATAGGGAGCGTGAGCTTTTGGCTCACGAAAGATCTGTTGCTGCAGCTAAGGATGCTGCCTTGCTTGCCATTCTGAAGAAGCTAACAGAACAATCATCCTCAGTCACTGTAGAAGTAAATGATATTCTATCTGATCAGAACATGATCAATAATATTCCAGAGGATAAAGacaaggagaaggagaaTAGTGGTGTTATGGAGAAGCTGCAAGAAGGTAGAAATAGAAGTGATGTTGGAAATTTCATACAAATGAGCTCCTCACGTTGGCCAAAAGAAGAAGTGGAAGCTCTGATTAGATTGAGAACAAACATGGATTTGGAGTATGATGGGAATGGACCCAAGGGACCTCTATGGGAAGAGATGTCCTCTGCAATGAAAAAGCTTGGGTACAATCGCAGTGCCAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAGGATGAGGGAGAAAAACAAGAGAAGGCCTGAGGATTCAAAGACATGCCCTTATTTTCACCAGCTAGATGCTCTATATAGTAGTAAGAAACGTAATGGTAACAGTAACAATAACAGTAATGATCAGTTGAAGGCAGAGGAGCTATTAATGCATATTATGAGTGGTCAAGAAGATCCACAATCATCATCTCAGGATGCTGCAACTGACAAGGAGAAGATGAACCAGAATGAAGGAGATAATAAGGATGATGGAGATCACATGGTAGCCAATAGCACTTCAATAGAAATCATGggttga 1479 0.4381 MLQQLSTLPETSGASIHPDDGRGGCSGPDSDGPKDHHHGLAGEEADRNSTANRWPREETMALLKIRSEMDVAFRDTTPKAPLWQQISRRLGELGYHRSAKKCKEKFENIYKYHRRTKDGRYGKPNSKTYRFFEQLEALQTPHPPHEQEQPTTLVQHAVPCSIRFPTSADYSDSTTSSNTKDSAEAATTTPKSDKRRLTQFFERLMKEVVEKQESLHRKFMEVLEKCEQDRIARDEAWKMQELARINRERELLAHERSVAAAKDAALLAILKKLTEQSSSVTVEVNDILSDQNMINNIPEDKDKEKENSGVMEKLQEGRNRSDVGNFIQMSSSRWPKEEVEALIRLRTNMDLEYDGNGPKGPLWEEMSSAMKKLGYNRSAKRCKEKWENINKYFKRMREKNKRRPEDSKTCPYFHQLDALYSSKKRNGNSNNNSNDQLKAEELLMHIMSGQEDPQSSSQDAATDKEKMNQNEGDNKDDGDHMVANSTSIEIMG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0323 492 MobiDBLite consensus disorder prediction 298 317 - -
Sto4g0323 492 CDD GT1 52 117 - -
Sto4g0323 492 ProSiteProfiles Myb-like domain profile. 46 110 IPR001005 -
Sto4g0323 492 ProSiteProfiles Myb-like domain profile. 332 390 IPR001005 -
Sto4g0323 492 MobiDBLite consensus disorder prediction 464 482 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 1 55 - -
Sto4g0323 492 CDD GT1 332 397 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 167 186 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 449 463 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 29 55 - -
Sto4g0323 492 Pfam Myb/SANT-like DNA-binding domain 332 419 IPR044822 -
Sto4g0323 492 Pfam Myb/SANT-like DNA-binding domain 52 138 IPR044822 -
Sto4g0323 492 Gene3D - 334 395 - -
Sto4g0323 492 Gene3D - 54 115 - -
Sto4g0323 492 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 4 481 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 445 492 - -
Sto4g0323 492 MobiDBLite consensus disorder prediction 167 194 - -
Sto4g0323 492 PANTHER - 4 481 - -
Sto4g0323 492 SMART sant 50 112 IPR001005 -
Sto4g0323 492 SMART sant 330 392 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0323 Sto-Chr4 2508365 2510192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0323 329 421 Trihelix Transcription Factor Family AT1G76880 45.161 1.94e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto4g0323 Myb_DNA-bind_4 8.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0323 - - zju:107425531 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0323 4 2508365 2510192 Sto4g0323 4 2508365 2510192 ECH
Sto3g3157 3 36433943 36435746 Sto4g0323 4 2508365 2510192 ECH