Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0321 ATGGCCGACGGTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTTGCTGGTGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCCGGCCTCGCCATACCGGTGTCATGGTTGGTATGGGCCAAAAAGACGCCTATGTTGGTGATGAAGCCCAATCAAAAAGAGTCAGCAACTGGGATGACATGGAGAAGATCTGGCATCACACATTTTACAATGAACTGCGGGTTGCTCCTGAGGAGCACCCAGTACTTTTGACTGAGGCCCCTCTCAACCCAAAGGCCAACAGAGAAAAGATGacccaaatcatgtttgagaCCTTCAATGTACCTGCCATGTATGTGGCCATCCAGGCTGTTCTGTCCTTATATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCTGGTGATGGTGTGAGTCACACTGTGCCAATCTATGAGGGGTATGCACTCCCACATGCCATCCTCCGTTTGGATCTTGCTGGTCGCGATTTAACTGATTCTTTGATGAAGATCCTCACTGAAAGAGGGTATATGTTCACCACCTCTGCCGAGCGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCATATGTTGCCCTAGATTATGAGCAAGAACTTGAGACTGCAAAGAGCAGCTCTTCAGTTGAGAAAAACTATGAACTTCCTGATGGACAAGTTATAACAATTGGAGCTGAGAGATTCCGTTGCCCAGAAGTTCTTTTCCAGCCATCTATGATTGGAATGGAAGCTGCTGGAATTCACGAGACCACCTACAACTCTATCATGAAGTGTGATGTGGATATCAGAAAGGATCTGTATGGAAACATTGTTCTCAGCGGAGGGTCAACTATGTTCCCTGGTATCGCAGACAGGATGAGCAAGGAGATCACTGCTCTTGCTCCTAGCAGCATGAAGATTAAGGTTGTGGCTCCACCAGAGAGAAAGTACAGTGTCTGGATTGGAGGATCAATTCTTGCTTCCCTGAGCACCTTCCAGCAGATGTGGATATCCAAGGGTGAATATGATGAGTCTGGTCCATCCATTGTGCACAGGAAGTGCTTCTAA 1095 0.4685 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0321 364 CDD NBD_sugar-kinase_HSP70_actin 10 170 - -
Sto4g0321 364 Gene3D - 10 358 - -
Sto4g0321 364 Gene3D - 127 327 - -
Sto4g0321 364 PRINTS Actin signature 28 37 IPR004000 -
Sto4g0321 364 PRINTS Actin signature 104 117 IPR004000 -
Sto4g0321 364 PRINTS Actin signature 129 148 IPR004000 -
Sto4g0321 364 PRINTS Actin signature 225 241 IPR004000 -
Sto4g0321 364 SMART actin_3 7 364 IPR004000 -
Sto4g0321 364 Gene3D Actin; Chain A, domain 4 169 260 - -
Sto4g0321 364 PANTHER ACTIN 1 363 IPR004000 -
Sto4g0321 364 ProSitePatterns Actins and actin-related proteins signature. 93 105 IPR020902 -
Sto4g0321 364 SUPERFAMILY Actin-like ATPase domain 6 142 IPR043129 -
Sto4g0321 364 Pfam Actin 5 364 IPR004000 -
Sto4g0321 364 ProSitePatterns Actins signature 2. 345 353 IPR004001 -
Sto4g0321 364 PANTHER ACTIN 1 363 - -
Sto4g0321 364 SUPERFAMILY Actin-like ATPase domain 136 364 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0321 Sto-Chr4 2497099 2498556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0321 1 364 Cytoskeleton Gene Families AT5G09810 95.225 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0321 K10355 - gmx:100789000 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0321 4 2497099 2498556 Sto4g0321 4 2497099 2498556 ECH