Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0317 ATGAATGGGATCATGGATTGTGAGTGTAATATTGATCACCCATTCAGCCCATCCTATATGTATCAACTCCATGAATATTGTAGCTTAGAAAATGTTTTTCCATTCCAaacagaagatgaagatgatcatCTCTTGTCTCCAAATACAATGATTCAACACCAAATGTTCAACCAAGAGTTTATGGACTTTGATTTCATGGATCCCAATAATGAATCAATAGTGGCAGACCCAGAATTGAGCCAAGAAATTTCTACTTCAAGTTCTTCCCAGCAGGAAAATGGTGGGGGTGACCCTTATTTGATGGGAATACAAGCAGAGCTAATGGAAGATAGCAGTTTAGCTGATCTCTTGTTAACAGGAGCTGAAGCTGTTGAAGCACAGAATTGGACTCTAGCCTCAGACATCATTAAGAAGCTTAAAAACAATGAATTGTATGTAGCAAATAATGGAGATAGTTTATTGAACAGGTTGGCTCTTTTCTTCACTCAAGGTCTTCATTACAAGACCATAAATGCTCTTCCAAACTCTGTTTCTACACAGACAAACACTATTTTCTCTGCCTTCCAGATGCTTCAAGAACTCTCTCCCTACCTCAAATATGCCCATTTCACAGCCAACCAAGCCATCTTTGAAGCCACAGAAGGTGATCATGAAGTCCATGTCATTGACTTTGACATCATGGAAGGAATCCAATGGCCACCATTGATGGTTGATCTTGCAATGAGGAAGTATACTTCCCTCAGAGTCACAGCCATCACAGTGGATCACCAAAATGCAGCCTTTGTACAACAAACAGGAAGAAGATTGAAAGAGTTCGCTGCTTCTATCAATTTCCCATTCACTTTCCATCAGGTAATGATTGGTAGGGAAGAAGATTTCCAGAGAATCATCATATTGGGAAGTCCTAGTCCTAAAGTTATAGTTAATTGTATGATACACCAGTTGATGCCTAACAGGAGTTTCTCATCAGTCAAAACTTTCTTGGATGGTGTGAGCAGAAAATTATCACCTAAGCTTGTTATTTTAGTGGAAGACGAACTGTTCAATTTTTCCAGACTCAAATCTATGTCCTTTGTGGAGTTCTTCTGCGAGGCTTTGCACCATTACACAGCAATTTCTGATTCACTTGCAAGCAGTTTCTTGGGAGACAACAAGATGAAGAAGTTAAGCTTTATAGAAAAAGAGGTTCTGGGGATTAGGATTATAGACAGTGTAATGCAGTTTCCTTGTGAAAGAGAGGAGAGAAACTTGTGGGAAGAAAGATTTTATAGCTTAAGAGGGTTTAAGAGAGTTCCTGTGAGTAATTGTAATATTTCTCAAGCCAAGTTCTTGGTGAGCTTGTTTGGTGGAGGACAAGAGCCATTGTTGATTGGGCTTCAAGTCGGTGCAGATATGGAATCCGAAGCAGATTTCATCATCTCCGAAAACGTTAGGGTTGTTGGAGACTACATTCTCAAGAAGAAGATCAGCGAGGGTTCTTTCTCCACAGTGTGGAGAGGCGAGCATAGACGGAGCAGCGACGAAGTGGCGGTGAAGCAAGTGTGCCTTTCCCGACTCAATCGGCGTCTCAAGAGCAGCTTGGACTGTGAAATCGATTTCTTGTCCTCCGTCAACCACCCTAATATAGTTCGCCTTCTCGACTTCTTCCAGgatgatgagtgtttctacCTGGTTCTGGAGTTCTGTGCTGGAGGAAATCTGGCTTCTTATATTCAGCGCCATGGGAGAGTTCAAGAACAAACTGCTAGAAAATTCATGCAGCATCTTGGCTCTGGTTTAAAGATATTACACTCTTATGGCATCATTCACAGGGACTTGAAGCCAGCGAACATTTTGCTATCAAGCCAAGGGGTTGATGCAGTGCTAAAGATAGCTGATTTTGGTCTATCAAGAACGTTGCACTCGGGTGAGTATGCCGAGACAGTTTGTGGATCTCCATTATACATGGCTCCTGAAGTTCTTCAGTTCCAGAAATATGATGACAAGgcAGACATGTGGAGTGTTGGTGCCATTCTCTTTGAGCTTTTAAATGGCTATCCTCCGTTTAATGGAAAGAATAATGTTCAGCTGCTGAAGAACATCAGATCCTGTAGTTGTCTTCCATTTTCTCAGCTGATCCTTCCAGGATTGGATCCTGACTGTCTTGATATATGTTCTAGACTACTGTGCTCAAATCCAGTGGAACGTCTGtcttttgatgaattttattggCATAGGTTTCTGAGAAAAGTCATGGGTTCGTAA 2244 0.4046 MNGIMDCECNIDHPFSPSYMYQLHEYCSLENVFPFQTEDEDDHLLSPNTMIQHQMFNQEFMDFDFMDPNNESIVADPELSQEISTSSSSQQENGGGDPYLMGIQAELMEDSSLADLLLTGAEAVEAQNWTLASDIIKKLKNNELYVANNGDSLLNRLALFFTQGLHYKTINALPNSVSTQTNTIFSAFQMLQELSPYLKYAHFTANQAIFEATEGDHEVHVIDFDIMEGIQWPPLMVDLAMRKYTSLRVTAITVDHQNAAFVQQTGRRLKEFAASINFPFTFHQVMIGREEDFQRIIILGSPSPKVIVNCMIHQLMPNRSFSSVKTFLDGVSRKLSPKLVILVEDELFNFSRLKSMSFVEFFCEALHHYTAISDSLASSFLGDNKMKKLSFIEKEVLGIRIIDSVMQFPCEREERNLWEERFYSLRGFKRVPVSNCNISQAKFLVSLFGGGQEPLLIGLQVGADMESEADFIISENVRVVGDYILKKKISEGSFSTVWRGEHRRSSDEVAVKQVCLSRLNRRLKSSLDCEIDFLSSVNHPNIVRLLDFFQDDECFYLVLEFCAGGNLASYIQRHGRVQEQTARKFMQHLGSGLKILHSYGIIHRDLKPANILLSSQGVDAVLKIADFGLSRTLHSGEYAETVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELLNGYPPFNGKNNVQLLKNIRSCSCLPFSQLILPGLDPDCLDICSRLLCSNPVERLSFDEFYWHRFLRKVMGS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0317 747 ProSiteProfiles GRAS family profile. 104 499 IPR005202 -
Sto4g0317 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Sto4g0317 747 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 453 IPR005202 -
Sto4g0317 747 PANTHER OS12G0162700 PROTEIN 10 453 - -
Sto4g0317 747 Pfam Protein kinase domain 484 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0317 747 ProSiteProfiles Protein kinase domain profile. 483 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0317 747 Pfam GRAS domain family 114 449 IPR005202 -
Sto4g0317 747 SMART serkin_6 483 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0317 747 MobiDBLite consensus disorder prediction 77 95 - -
Sto4g0317 747 Gene3D Transferase(Phosphotransferase) domain 1 474 746 - -
Sto4g0317 747 CDD STKc_ATG1_ULK_like 489 740 - -
Sto4g0317 747 MobiDBLite consensus disorder prediction 77 98 - -
Sto4g0317 747 SUPERFAMILY Protein kinase-like (PK-like) 471 744 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0317 Sto-Chr4 2455456 2460396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0317 473 730 CBL-interacting serine-threonine protein kinases AT5G35410 37.643 9.37e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sto4g0317 GRAS 3.3e-67 CL0063
TF GRAS Sto4g0317 GRAS 3.3e-67 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0317 - - gmx:100804613 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0317 4 2455456 2460396 Sto4g0317 4 2455456 2460396 ECH