Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0308 ATGGCTCCTGCCCCCTCTGAGGCGGCAGCTCAGAGGCTCGTTGGCTTCTGTCGCCGCACACAGGCGCCGCGCCACTCGTCGCCTCCGGCCTCTCCGCCGCCGAAGAAGTATAAGCATTTGAGCGAGATAATGATGAAAGCTCGCTATGCTGTCATTGAGGAGGATGATTACAGCGACGTGACCTGTGAGCAATGCGGCTCTGGTGAGCGATCAGAGGAGCTGATTCTGTGTGATAAATGCGATAAAGGCTTCCATATGAAATGCGTGAGACCCATTGTGTCAGGAAAATTGCTGACCCTGAGAATTGAGCCCAATTTATATTTGGCTTTATACTTGAATGTTGGGTTGAATTTGATTTCAGATGCCAAGAAACGTCGGAAACGTTCAAGATCTCTGGTATTGCaaaagagaaggaggagatTGATTCCATTTATTCCAACAGAAGATCCTGCCCAAAGACTGAAACAGATGGGTTCCCTTGCTTCTGCTTTAACAGCATTGAATATGGAGTTCAGTGATGATCTCACATACATGACTGGAATGGCTCCCAGATCTGCTAATCAAGCCATGTTTGAAAATGGTGGCATGCAGGTACTCTCCAAGGAAGATACTGAGACCTTGGAACATTGCAGAGCTATGTGTAGAAGAGGCGAATGGCCTCCCCTTATGGTTGTTTTTGATTCATGTGAAGGCTATACTGTACAGGCAGATGGTCCAATCAAGGATTTGACAGTCATTGCTGAATACACGGGTGACGTGGATTTCATTAAGAATCGAGAACATGATGATTGTGACAGTATGATGACCCTTCTTTTAGCTACAGATTCTTCCAAAAGTCTAGTTGTCTGCCCAGATAAACGTGGAAACATTGCTCGCTTCATTAATGGCATCAACAATCATACTCAGCAATTTATTGTAATTTGTGATGTAGAGCTGGCCCAATCATGTGGCTTAGAGATGATTAGAGTAGCACAGGAAAACTTTCTTCATTTAGCCCATGTCTCAAGATATGAGCTAAGATAG 1023 0.4438 MAPAPSEAAAQRLVGFCRRTQAPRHSSPPASPPPKKYKHLSEIMMKARYAVIEEDDYSDVTCEQCGSGERSEELILCDKCDKGFHMKCVRPIVSGKLLTLRIEPNLYLALYLNVGLNLISDAKKRRKRSRSLVLQKRRRRLIPFIPTEDPAQRLKQMGSLASALTALNMEFSDDLTYMTGMAPRSANQAMFENGGMQVLSKEDTETLEHCRAMCRRGEWPPLMVVFDSCEGYTVQADGPIKDLTVIAEYTGDVDFIKNREHDDCDSMMTLLLATDSSKSLVVCPDKRGNIARFINGINNHTQQFIVICDVELAQSCGLEMIRVAQENFLHLAHVSRYELR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0308 340 Pfam PHD-finger 62 92 IPR019787 -
Sto4g0308 340 Gene3D SET domain 126 334 IPR046341 -
Sto4g0308 340 PANTHER HISTONE ACETYLTRANSFERASE 15 302 - -
Sto4g0308 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 98 IPR013083 -
Sto4g0308 340 SUPERFAMILY FYVE/PHD zinc finger 27 92 IPR011011 -
Sto4g0308 340 SUPERFAMILY SET domain 208 295 IPR046341 -
Sto4g0308 340 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR5 15 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0308 Sto-Chr4 2392405 2395864 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto4g0308 PHD 1.8e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0308 K24406 - fve:101315097 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0308 4 2392405 2395864 Sto4g0308 4 2392405 2395864 ECH