Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0291 ATGCCCGCTTGGTGGGGAAGGAAATCCAGCAAGAACAAGGAGGAGCAGCGGCCGCAGCAGCCGCAGCAGCAGCAGCTTCCTCAGCAGGAGCCTCATGGGGTTCTTCAGTTTAATTTCATCAAATCCCCGATTCGGAATAACGGGGCGGCGAGGAAAGGGAAGGAGAAACCCAAGAGCTTTGACGAGGTCTCAGCCGCGATGCTTTCTCGGGGTTCACCCCGAGCCAGCAGGGATTACACTTCTGCTTCTGGGGTTGGTGGTTCGTCTTCCGGATTTTCTTGTTTCGATTCAGATGGTGCGGAGAGAAAGGGCCTTCCCTTGCCTCGACCATCCGTCTCGTCCCCTCAGAGATTTGGGAACGATCAAGGAGATGGAGATGGGTTGGGATCTGCGTCGATCTCTGGTTCTAGCGTGAGTTCTACTGGCTCCTTTGATGATCATCCAATCTCTCCTCACTTTGATGGCATCAGAGGACGAAGTGACATGAAGATCAAAATGAGGTCGAAAAGCCCAGGTCCTGGGTCTAGAGGGCCCACCAGCCCTACTTCACCTCTTTATCCAAGGTTGCAAGCTTTGAGTCTTGACTCTCCTACAGGCAAACAAGATGATGTAAGGAGTCAATGTCATCCACTGCCTCTTCCTCCAGGTTCACCTACTAGTCCTTCTGCACTTTCCAGTACACGATCAAATGGTCTGCTAGAAAACGCTACGGGCAATCTTTCCAAGTGGAAAAAAGGGAAGCTTTTAGGACGGGGAACATTTGGGCATGTTTACCTGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTGTCTCAGATGATCAAACGTCAAAAGAGTGCCTCAAACAACTCAACCagGAGATATGTTTGCTTAGTCAGCTTTCACATCCAAACATAGTTGAATACTATGGGAGTGAACTGGGAGAAGAATCACTTTCAGTTTATTTGGAATATGTTTCTGGTGGTTCTATTCACAAACTACTTCAGGAATATGGAGCATTTAGGGAACCTGTTATTCAGAATTATGCTAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAACACTGTACACAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAACGGTGAAATCAAGTTGGCAGACTTTGGGATGGCTAAACATATGAAATCTTGTGTCTCGATGCTTTCTTTCAAGGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATTCAAACGGCTATAGTCTTGCTGTTGATATATGGAGCTTGGGATGTACAATTCTTGAAATGGCAACATCAAAGCCTCCATGGAGTCAGTATGAAGGGGTAGctgcaatttttaaaattgggaACAGCAAAGATATGCCTGAAATTCCTGAGCATCTTTCAAATGATGCTAAGTCTTTCATAAAGCAATGCTTACAGAGAGACCCCTCAGCTCGCCCAACAGCTCAACGGTTACTAGACCATCCTTTTATCCGCGATCAATCATCAACAAGAGCTGTAAATGTCAGCTTAACCAGGGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACACCGCCACAAGGAGAGTTTCATTCCAATAGGATTAGTATGACTTCAGTTGATGGAGATTATTCAACAAAGCCAGCTTTTACAACTTCAAGAGCGTTAAGGAGCCCAATAGATAACAGTAACACAAGAATGATTACGTCCTTACCGGTATCTCCCTGCTCAAGTCCATTGCGACAACACGGACCAGCGCACAAGAGCTGTATGCTTTCTCCTCCACATCCAACTTACACTATGATGGGACAAAATACGTACAATTTTAGTGACTTCTCTTCATATCCGATGAGATCGAACGCAACATTCAGTCTTGATCCTTGGTACGAAACATCTCTATACCATGCCCATACACCTGGTGGATCCCCAAGAAGGAGACTCATTTAA 1953 0.4552 MPAWWGRKSSKNKEEQRPQQPQQQQLPQQEPHGVLQFNFIKSPIRNNGAARKGKEKPKSFDEVSAAMLSRGSPRASRDYTSASGVGGSSSGFSCFDSDGAERKGLPLPRPSVSSPQRFGNDQGDGDGLGSASISGSSVSSTGSFDDHPISPHFDGIRGRSDMKIKMRSKSPGPGSRGPTSPTSPLYPRLQALSLDSPTGKQDDVRSQCHPLPLPPGSPTSPSALSSTRSNGLLENATGNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDQTSKECLKQLNQEICLLSQLSHPNIVEYYGSELGEESLSVYLEYVSGGSIHKLLQEYGAFREPVIQNYARQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHMKSCVSMLSFKGSPYWMAPEVVMNSNGYSLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKSFIKQCLQRDPSARPTAQRLLDHPFIRDQSSTRAVNVSLTRDAFPYMFDGSRTPPQGEFHSNRISMTSVDGDYSTKPAFTTSRALRSPIDNSNTRMITSLPVSPCSSPLRQHGPAHKSCMLSPPHPTYTMMGQNTYNFSDFSSYPMRSNATFSLDPWYETSLYHAHTPGGSPRRRLI 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0291 650 CDD STKc_MEKK1_plant 242 499 - -
Sto4g0291 650 ProSitePatterns Protein kinases ATP-binding region signature. 249 272 IPR017441 GO:0005524
Sto4g0291 650 SUPERFAMILY Protein kinase-like (PK-like) 241 500 IPR011009 -
Sto4g0291 650 ProSiteProfiles Protein kinase domain profile. 243 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0291 650 Pfam Protein kinase domain 244 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0291 650 MobiDBLite consensus disorder prediction 173 203 - -
Sto4g0291 650 MobiDBLite consensus disorder prediction 1 231 - -
Sto4g0291 650 SMART serkin_6 243 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0291 650 MobiDBLite consensus disorder prediction 127 146 - -
Sto4g0291 650 MobiDBLite consensus disorder prediction 150 166 - -
Sto4g0291 650 MobiDBLite consensus disorder prediction 16 32 - -
Sto4g0291 650 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 632 - -
Sto4g0291 650 Gene3D Transferase(Phosphotransferase) domain 1 240 519 - -
Sto4g0291 650 MobiDBLite consensus disorder prediction 74 95 - -
Sto4g0291 650 PANTHER MAP KINASE KINASE KINASE 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0291 Sto-Chr4 2227083 2231889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0291 1 561 MAP Kinase Kinase Kinase AT1G53570 56.217 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto4g0291 Pkinase 3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0291 K04421 - gmx:100813122 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0291 4 2227083 2231889 Sto4g0291 4 2227083 2231889 ECH