Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0286 ATGCCCAGAAGCAGTAATGGTGAGACTAGAAAGAGTTGTAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGACTAAAACAACTTGTGGAGCAGTATGGTCCCCAGAACTGGAATTTTATTGCAGAACATCTTGATGGAAGATCAGTGGTCTTTGAACCACCGCGATCTCGCACAACAGCCTCCCGGGTTCTATCGGTCACTCCCAGCAATGGGCTCTATAGTACCCGAGATTCTAAATTAACAAGAAATGGGGTTTTGAGTCCAATTCAATCGGTCGGTACTGGAGGGATTAGTCACCGGACCTGCTCTGGGAAAAGTTGCAGATTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAAGGCCATTcacagaggaagaggaagaaatgCTGCTATCTCTTCACAAAGTAAAAGGAAACAAATGGGCTGCAATTTCAAGGTTCTTACCAGGAAGAACTGACAATGCTGTGAAGAATCACTTCCATGTATTAATGGCAAGAAGGAAGAGAGATCACTTCACACTCTTTGGTGAGAGAAGAAGCCATGAAATTCCTAATAATCACATTCCCATTAGCAATCCTAATCCAATGAAAAATTTCAAGTCCCAAGACACCAGAAACATGAGCATCTTTGGAATTCCCAGTATTGGTAAGGTGGTTCCTCTTCCTTATAATAggttctcatcatcatcatcaaactcCACTTTCAATTATTACAATGGCCAAAGAATTGAGGATTCTTCTAATTCCAACCAGAGCAAGAAATTAGGAGAAAAGCATTTTCTGGCATTTTCTGAGTTGCCAAACAAGGAAGAAGGACAAGGTGAAAGGCTAAATGGTGGTAGTAGTAATAATGTTTCCTTCATAGATTTTCTTGGTGTGGGAATTTGA 897 0.3946 MPRSSNGETRKSCNRGHWRPAEDERLKQLVEQYGPQNWNFIAEHLDGRSVVFEPPRSRTTASRVLSVTPSNGLYSTRDSKLTRNGVLSPIQSVGTGGISHRTCSGKSCRLRWYNQLDPNIVKRPFTEEEEEMLLSLHKVKGNKWAAISRFLPGRTDNAVKNHFHVLMARRKRDHFTLFGERRSHEIPNNHIPISNPNPMKNFKSQDTRNMSIFGIPSIGKVVPLPYNRFSSSSSNSTFNYYNGQRIEDSSNSNQSKKLGEKHFLAFSELPNKEEGQGERLNGGSSNNVSFIDFLGVGI 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0286 298 Gene3D - 15 122 - -
Sto4g0286 298 PANTHER MYB PROTEIN-RELATED 103 298 - -
Sto4g0286 298 PANTHER MYB PROTEIN-RELATED 6 49 - -
Sto4g0286 298 SUPERFAMILY Homeodomain-like 104 171 IPR009057 -
Sto4g0286 298 Pfam Myb-like DNA-binding domain 15 49 IPR001005 -
Sto4g0286 298 Pfam Myb-like DNA-binding domain 122 166 IPR001005 -
Sto4g0286 298 SMART sant 121 169 IPR001005 -
Sto4g0286 298 SMART sant 14 118 IPR001005 -
Sto4g0286 298 CDD SANT 18 51 IPR001005 -
Sto4g0286 298 ProSiteProfiles Myb-like domain profile. 117 167 IPR001005 -
Sto4g0286 298 PANTHER MYB TRANSCRIPTION FACTOR 103 298 - -
Sto4g0286 298 PANTHER MYB TRANSCRIPTION FACTOR 6 49 - -
Sto4g0286 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 171 IPR017930 -
Sto4g0286 298 ProSiteProfiles Myb-like domain profile. 10 49 IPR001005 -
Sto4g0286 298 Gene3D - 123 190 - -
Sto4g0286 298 SUPERFAMILY Homeodomain-like 11 49 IPR009057 -
Sto4g0286 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 49 IPR017930 -
Sto4g0286 298 CDD SANT 132 167 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0286 Sto-Chr4 2195547 2196858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0286 1 49 MYB Transcription Factor Family AT4G33450 68.627 1.79e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto4g0286 Myb_DNA-binding 6.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0286 K09422 - mus:103997447 148.288