Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0280 ATGGCAGTCACTGAGCGGAAACCAGTTCTAATTGAGGCCCTAACATACAGAGTGGGACACCATTCCATGTCAGATGATTCCACCAAGTATCGTCCAATCAATGAGATTGAATTATGGAGATCGGCACGAGATTCTGTGGCTAGATTTAGAAAATGGATTGAAAGAAATGGTTGGTGGAATTGTAAGGCTGAATCAGAGCTCAGGAATAATGTTAGACAGGAGCTCCTCCCTCTTGATGACCCCACTTCAAATCATCTCAATATTCTCACACAAGACCCTAAATTCCAATCCTTCCTCCAATTATTCCAAAAGGGTACCACCAAAATCAAAACTTGTCTATGCAATCTCATAGATTCAGCAGCTTCATCATCACATTCACAAGATCTAATCTTCTTGCTTGGAAACTCCCAAAAACTACTCCAAGAAATCATCATCCTTCTTGATgataacaacaataacaataactcCGAGGCTTCCATGGCTGCAATTAAAGCCATATCATCCCTAAGCACAGTGGAACCAAACAGAGAGAAACTGGTCAGAGCAGGAGCCATAGATGGCATCATAAGGGAAAGTGGGGCAGCAAGAGAGGAAGCCATTGGAGAAGGGGTTTTGTCACAATTATTGCTGCTTTTGCAGAGTCAGTGTAGTGCCAGAACCAAGACGAAGGCCAGAATGCTTCTGAAATTGCTCAGATCCAAGTGGGTGAGTGAGAATGTACCAAAACAGGTTTAG 735 0.419 MAVTERKPVLIEALTYRVGHHSMSDDSTKYRPINEIELWRSARDSVARFRKWIERNGWWNCKAESELRNNVRQELLPLDDPTSNHLNILTQDPKFQSFLQLFQKGTTKIKTCLCNLIDSAASSSHSQDLIFLLGNSQKLLQEIIILLDDNNNNNNSEASMAAIKAISSLSTVEPNREKLVRAGAIDGIIRESGAAREEAIGEGVLSQLLLLLQSQCSARTKTKARMLLKLLRSKWVSENVPKQV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0280 244 Pfam Dehydrogenase E1 component 2 74 IPR001017 GO:0016624
Sto4g0280 244 SUPERFAMILY ARM repeat 96 218 IPR016024 -
Sto4g0280 244 Gene3D - 79 240 IPR011989 -
Sto4g0280 244 PANTHER OS02G0542800 PROTEIN 188 234 - -
Sto4g0280 244 PANTHER OS02G0542800 PROTEIN 74 190 - -
Sto4g0280 244 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 3 75 IPR029061 -
Sto4g0280 244 PANTHER WDSAM1 PROTEIN 188 234 IPR045185 GO:0061630
Sto4g0280 244 PANTHER WDSAM1 PROTEIN 74 190 IPR045185 GO:0061630
Sto4g0280 244 Gene3D - 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0280 Sto-Chr4 2143525 2154301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0280 8 98 Acyl Lipid Metabolism Gene Families AT1G24180 29.000 2.32e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0280 K00166 - pop:7466848 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0280 4 2143525 2154301 Sto4g0280 4 2143525 2154301 ECH
Sto3g3208 3 36849952 36857245 Sto4g0280 4 2143525 2154301 ECH