Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0279 ATGGGAGATGAAAGCGTCAACCTTCCTCCTGGGTTTCTCTTCTCCCCAACGGATGAAGAACTCGTCCTTCACTTTCTCTATAGCAAAGTCACTCTGTTAACATGCCATCCTAACATCATCCCTGATCTTGATCTTTCTGTGTCTGATCCTTGGGAATTAAATGgaaaggcGTTGTCAAGTGGAAATCAATACTATTTCTTCACCAAAGTGAACGAGGACAGAGCCACAGAAAGTGGGTATTGGAAGGAAATAGGTGTCACTGAAACTATAGTCTCAGATGCTGACAAGAAAGTAGGAATCAAGAAGTACCTCGTATTCAACATTGGGGAAGCTCCACAAGGTACTGAAACCAGTTGGATGATGCAAGAATATTATCTTTGCTCATCTGGGTTTAACACTGCACCTTATAGAAGTACTAGAGGAAGACGTAAACCTGATCAAAGCCAGAGTAAATGGGCGTTGTGCCGTGTTTATGAAAGGAACAAAGATTCTGAACAAGGTGTGAACTGTTATAGTGATGACGAAGATGACAGTAGAACAGAACTTTCATGGCTGGACGAATCCTGTAAGAATTGTCATATCATACCCCTCATTCCGCTTCATCTCCGTATTCGCCAATCGCCGTATCTTGTAATTGGGTGTTCGTCTCATGGCTCTTTGCGTGAGGAAATCAACGAAGAAGCTCTTGGAGTTCTTCGACCTCTAACGCTCATTCTCGCCCAAATTTCAGAAACTGGAGTGATATTCGCAATGCAATATAGTATTCCTTTCTTCTTCCCGCCGTTTCGAGTCGAGTGCCGCACGGCACAAGGTCCTTTGAATTCCACTGACGATGCGTATGGGAATCAGATGAACGTCAACCCGAAAACGGAACCTTCGTCGGCGCCGGCGAGCGATTCCAGTGACGTCAACGACGTCGACACTACTCCGATGACCTTGCGCATACCGGACCTGATTTTTCCAGCTGCGATTCGCAATTCGCATAAAACAATTTGA 996 0.4468 MGDESVNLPPGFLFSPTDEELVLHFLYSKVTLLTCHPNIIPDLDLSVSDPWELNGKALSSGNQYYFFTKVNEDRATESGYWKEIGVTETIVSDADKKVGIKKYLVFNIGEAPQGTETSWMMQEYYLCSSGFNTAPYRSTRGRRKPDQSQSKWALCRVYERNKDSEQGVNCYSDDEDDSRTELSWLDESCKNCHIIPLIPLHLRIRQSPYLVIGCSSHGSLREEINEEALGVLRPLTLILAQISETGVIFAMQYSIPFFFPPFRVECRTAQGPLNSTDDAYGNQMNVNPKTEPSSAPASDSSDVNDVDTTPMTLRIPDLIFPAAIRNSHKTI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0279 331 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
Sto4g0279 331 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
Sto4g0279 331 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Sto4g0279 331 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Sto4g0279 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 188 - -
Sto4g0279 331 MobiDBLite consensus disorder prediction 274 307 - -
Sto4g0279 331 PANTHER NAC TRANSCRIPTION FACTOR 56 2 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0279 Sto-Chr4 2135841 2138923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0279 1 161 NAC Transcription Factor Family AT1G61110 41.243 1.54e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g0279 NAM 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0279 - - gmx:100170711 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0279 4 2135841 2138923 Sto4g0279 4 2135841 2138923 ECH