Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0278 ATGCAAACCAGCTATTCAATGAAGAAACAAGGTTGTGAGGTTGAAGCAATAGGCATCAATTACAAGATCGGCACACAGAAAAAGGAGAAACAACCCTTTAAAAATTCTAGCAAATCTCCACAACTGAATGATGAGGAGGAACAAGATGGTCAAGCTCAAGAACAACCAGAAGAGGAAGAAGCAAAAAAAGCTGGACAACCATGCATTACTGGAGTAAGGCATGTCCTTAAGGACGTGAACTGCCAGGCCAAGCCATGGGAAATACTCGCCATTGTTGGACCAAGTGGAGCTGGAAAATCATCCTTGCTTGAGATTCTTGCTGGTAAAGTCACCCCACAAAGTGGTTCCATCTTGGTGAACCAGAAGCCTGCAGATAAAGCACAGTTCAGGAAGATTTCAGGGTATGTCACACAAAAGGACACTCTTTTTCCCTTACTTACAGTGGAAGAAACTCTAATGTTCAGTGCAAAATTGAGGCTAAAGCTTCCTGTAGAACAACTCTGCCTCAGGGTAAAATCACTGATTCAAGAGCTAGGACTCAGCCATGTTTCTGGGACAAGAATTGGagatgaaagagagagagggatttCTGGTGGAGAGAGGCGAAGAGTTTCAATTGGTGTTGAAGTCATCCATGATCCAAAAGTTCTGATTTTGGATGAACCCACTTCTGGGCTTGATAGTACTTCTGCACTACAAATCATTGATATGCTCAAGGTCATGGCTGATTCTAGAGGAAGAACTATAATACTTAGTATTCATCAACCTGGGTTCAGAATAGTGAAATTGTTCAATTCAATATTGTTGTTAGCCAATGGGTCTGTGTTGCATCACGGCACTGTGGATTTACTGGGTGTGAACATGAGATTAATGGGTCTGGAGCTTCCTCTTTATGTTAATGTAGTTGAATTTGCCATTGAATCCATAGAAACCATTGAGCAACAACAGCAAAAATGCCAGCAAGCACAGCAGCTAGAAATGCtacaacaacaaaagaaaggtgaagaagatgaaggtgATGGGAAGAGTATGAGTGGTAAGCTTACTCTACAACAGCTCTTTCAGCAATCCAAGGTGATAGATGAGCAAATTATCAACTCAGGAATTGATATCACTTGTGATTTTGCAAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAATATCTTCCGTACAAAGGAGCTCTTTGCATGTAGGACTATTCAGATGCTGATTTCTGGACTGGTTTTGGGATCAATCTTTGGTAATCTCAAGGATGATCTAGTAGGAGCTGCAGAAATGGTAGGTCTATTTGCATTTATACTAACATTTTTGTTAACAAGCACCATTGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCATGTGGGAGCTATAGGGTATCATCCTATGCTATTGCCAATGGTCTTGTTTACTTGCCATTTCTACTCATCCTAGCCATTCTATTTACAGTACCTTTATACTGGCTTGTTGGGCTCAATCGGAATTTCACAGCATTTTTACACTTCTTGTTGCTAATTTGGTTGATTCTTTACACTGCAAATTCAGTTGTGGTATGTTTCAGTGCTCTGGTTCCCAATTTCATAGTTGGGAACTCTGTGATTTCTGGTGTCATGGGATCATTCTTCTTGTTCTCAGGCTACTTCATATCAAAGAACGAAATCCCAAAatactggattttcatgcactACATATCTCTGTTCAAGTATCCCTTTGAAGGGTTTCTGATAAATGAGTTCTCCAACTCAAGGAAGTGCTTGGGGTATATGTTTGGGGCATGTATAGTGACTGGAGAGAGTGTGCTTAAAGAAGAAGGATATGGGAATGAAAGTGGTAGATGGAAGAATGTGGGGGCCATGGTGTGCTTCATCTTGGTTTACAGATTCACTTTCCTGCTTCCAAATCTCGTCATCGTCATCTTTGGATGGAGGGTGGCCTCTGTCTTTCACCAAAAAAGCATGCACATGACGCAATACAACTCCGACCTCGTACCAAAATGTCATACACTCAATCTCAGTATCAGGTTCCGTTATGGAGTTGAAGATGTTGCTAGTGTCATAAAGAATGCGAAAGAACTAGAAATGTTGGTTTAG 2127 0.3945 MQTSYSMKKQGCEVEAIGINYKIGTQKKEKQPFKNSSKSPQLNDEEEQDGQAQEQPEEEEAKKAGQPCITGVRHVLKDVNCQAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGSILVNQKPADKAQFRKISGYVTQKDTLFPLLTVEETLMFSAKLRLKLPVEQLCLRVKSLIQELGLSHVSGTRIGDERERGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADSRGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGTVDLLGVNMRLMGLELPLYVNVVEFAIESIETIEQQQQKCQQAQQLEMLQQQKKGEEDEGDGKSMSGKLTLQQLFQQSKVIDEQIINSGIDITCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFGNLKDDLVGAAEMVGLFAFILTFLLTSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKNEIPKYWIFMHYISLFKYPFEGFLINEFSNSRKCLGYMFGACIVTGESVLKEEGYGNESGRWKNVGAMVCFILVYRFTFLLPNLVIVIFGWRVASVFHQKSMHMTQYNSDLVPKCHTLNLSIRFRYGVEDVASVIKNAKELEMLV 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0278 708 MobiDBLite consensus disorder prediction 27 45 - -
Sto4g0278 708 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524
Sto4g0278 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 284 IPR027417 -
Sto4g0278 708 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 646 - -
Sto4g0278 708 MobiDBLite consensus disorder prediction 25 66 - -
Sto4g0278 708 Pfam ABC transporter 76 224 IPR003439 GO:0005524
Sto4g0278 708 SMART AAA_5 85 274 IPR003593 -
Sto4g0278 708 Gene3D - 51 340 IPR027417 -
Sto4g0278 708 Pfam ABC-2 type transporter 383 591 IPR013525 GO:0016020|GO:0140359
Sto4g0278 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 297 IPR003439 GO:0005524
Sto4g0278 708 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 7 646 - -
Sto4g0278 708 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0278 Sto-Chr4 2123161 2125840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0278 74 302 Calmodulin-binding Proteins AT2G36910 23.482 4.90e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0278 K05681 - gmx:102665974 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0278 4 2123161 2125840 Sto4g0278 4 2123161 2125840 ECH