Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0270 ATGGCTGTTGATGATAATGGCGACTTCAATGATATTATGGACCTTCAAGACTTAGCCGTTTTACCAAAGTTCCATGAGTTCCCAGAGAGCCAGCTTTGTGTACCACCTGACCCCATACACGACTTGGAATGGTTCCCAAGCTTCTCTGACGATTTTATATCACTAAACTTCCCAGACACTCCTCCaaaggatgatgatgatgatgatgatgatgatggggtTGGATCGATTAATTCGGAGGCGAAGTTGGGTGGCTTTACGAAGAAGAAGGCTAGGACGAcgatgaagaaaaagaataagaacGTTAGTATTAATTGGGAGAGAAGTTTGAAGAGGAAGAGGTGTAGGCACTGTGAGACGGAGGAGACGCCGCAGTGGAGGGTTGGGCCGATGGGGCCGAAGACGCTGTGCAATGCGTGCGGGGTGCGGTTCAAGTCCGGGAGGCTAGTGCCGGAGTATCGCCCGGCGGGGAGTCCAACTTTTGATGCGTCTAGGCATTCTAATTACCATAACAAAATACTGAGAAGGCGTGGTTTTAGTtag 543 0.4438 MAVDDNGDFNDIMDLQDLAVLPKFHEFPESQLCVPPDPIHDLEWFPSFSDDFISLNFPDTPPKDDDDDDDDDGVGSINSEAKLGGFTKKKARTTMKKKNKNVSINWERSLKRKRCRHCETEETPQWRVGPMGPKTLCNACGVRFKSGRLVPEYRPAGSPTFDASRHSNYHNKILRRRGFS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0270 180 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 113 171 - -
Sto4g0270 180 Pfam GATA zinc finger 115 148 IPR000679 GO:0006355|GO:0043565
Sto4g0270 180 ProSiteProfiles GATA-type zinc finger domain profile. 109 145 IPR000679 GO:0006355|GO:0043565
Sto4g0270 180 Gene3D - 109 176 IPR013088 GO:0006355|GO:0008270
Sto4g0270 180 CDD ZnF_GATA 114 162 IPR000679 GO:0006355|GO:0043565
Sto4g0270 180 PANTHER GATA TRANSCRIPTION FACTOR 19 179 - -
Sto4g0270 180 PANTHER GATA TRANSCRIPTION FACTOR 4-LIKE 19 179 - -
Sto4g0270 180 SMART GATA_3 109 159 IPR000679 GO:0006355|GO:0043565
Sto4g0270 180 MobiDBLite consensus disorder prediction 56 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0270 Sto-Chr4 2038265 2038807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0270 32 177 C2C2-Gata Transcription Factor Family AT3G60530 41.875 2.19e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Sto4g0270 GATA 6e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0270 - - hbr:110642622 170.244