Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0268 ATGGAGTTGATCGGACGCCGTGAGAAGTTGAACGGCGACACCGGCGACGGCGGTCGGACGGTCTTGGTGGGCGTGAAATCTGATTTTTCTCGGAGCCGTGAATTGCTGAAATGGGCTCTCGACAAAATCGCAGAACCCGGCGACCTAGTCATCGCGATTCACGTGCTCGATTCAAAGAATACGGCATTGATTCCCTCTCTTGTGAAGGCATTTGATTTTATTCTCGCGGAGTACGAAGATTACTGCAATTTGAAGCAGATTGATCTCAAGTTCAAAGTACGTATAGGCGCGCCGGCTCGGAAACTTCTAGTACAGGAGGCGAAATCGTTGGGTGCGTCAACGGTACTTGCGGGAACTTCTAATGCTCGTTTCACAATCCGATCATCAGCATCCGTCATCGAGTACTGTGCAAGAAAATTGCCCAAGTGTATATCTGTGTTTGCTGTAGATAAGGGCAAAATTGTATTCCAAAGAGACGCTATTAATCATCAAGTAAAATTGAATGAAGGCCCAATTTTGTCACAAAATTCCATCTCTGTTCTTACCAAGGAAAATCTGAAGAACTATATGTGTTGTGCAAGGGTGAAAACGCTGCTAGAAAATTCTGCAACTAATCCTACGGTAGGGTTGCCTGATGATGTTTCTAGTAGTTCAATCATGGTTCAGGAATCAAACCAGTCAAGTTATGACTGCTCACCACTGTCCAAAAAGAACCTGAAGAAATCTTTTGTGACAAATGCCTATGTTTTTAAAAGGGCATTTCAAAAACCCAAGAGGCATTTTTCTCGCTTAGTCCATCCAGATCATAAGCAGAGTACTATTGACCATAATGACGATCACATTCACATTCCTAAAGAATTGTTGGGCTTACAGGATAGGTGCACATTATATAGTTTCCAAGAACTTGCATCTGCCACTTCCAACTTCGCACCTGaGAATTTGATTGGCCGAGGTGGTAGTAGTCTTGTTTACAAAGGATGTCTTCCTGAAGGCAAGGAATTGGCGGTGAAAATTTTAAGTCCATCCCAAGATGCATTAAAAGAGTTTGTTCTTGAAGTTAAGACTCTGACAACTTTGCATCACAAGAACATTATATCTCTATCTGGGTTTTGTTTGGAGAACGACAATCTACTATTGGCTTACGATTTTTTATCAAGAGGAAGCCTGAAAGATAACATTCATGGAAAAAAGGACTGTGGTGCATTTAATTGGAACGAGCGATACAAGGTGGCCGTGGGTATAGCTGAGGCATTGGATTATTTGCACAATGGCTGTGCACAGACTGTGATCCATAGGGATGTGAAATCTGCAAATATCCTTCTTTCagatgattttgatcctcagCTATCGGATTTTGGACTGACCAGTCTGAATTCACCATCCCATGTTATTTGTACTGATGTGGTTGGAACATTTGGATACCTGGCTCCAGAATACCTTATGCATGGTACAATGACTGAAAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTATCCAGTAGGATGCCCATTAAGACTAAGAATCAGGAGAGCCTTGCAACGCCAATTTTAAAGTGTGGGAAGATTTCCCAATTGCTTGATCCAAGCTTGGGTAGTGATTACGATCCAAGCCAGATTGAAAGAATGATATTGAAACTTCTGTGTGGTGGTGATGAAGAAGTAACAAGATGGGCAAAACAAGAAGTTAGTGCACCAGAGGAACTTAATGTCTTGGATGGAGAACCAGTTCGAATTGATAATATTCAGAGTAAGTCTCCTACGCCTGTGTGCTCTTGCTGTGATGATTCTAATAAAAGGGCTGCGGGTCCATAA 1824 0.4183 MELIGRREKLNGDTGDGGRTVLVGVKSDFSRSRELLKWALDKIAEPGDLVIAIHVLDSKNTALIPSLVKAFDFILAEYEDYCNLKQIDLKFKVRIGAPARKLLVQEAKSLGASTVLAGTSNARFTIRSSASVIEYCARKLPKCISVFAVDKGKIVFQRDAINHQVKLNEGPILSQNSISVLTKENLKNYMCCARVKTLLENSATNPTVGLPDDVSSSSIMVQESNQSSYDCSPLSKKNLKKSFVTNAYVFKRAFQKPKRHFSRLVHPDHKQSTIDHNDDHIHIPKELLGLQDRCTLYSFQELASATSNFAPENLIGRGGSSLVYKGCLPEGKELAVKILSPSQDALKEFVLEVKTLTTLHHKNIISLSGFCLENDNLLLAYDFLSRGSLKDNIHGKKDCGAFNWNERYKVAVGIAEALDYLHNGCAQTVIHRDVKSANILLSDDFDPQLSDFGLTSLNSPSHVICTDVVGTFGYLAPEYLMHGTMTEKIDVYAFGVVLLELLSSRMPIKTKNQESLATPILKCGKISQLLDPSLGSDYDPSQIERMILKLLCGGDEEVTRWAKQEVSAPEELNVLDGEPVRIDNIQSKSPTPVCSCCDDSNKRAAGP 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0268 607 CDD USP_Like 20 144 - -
Sto4g0268 607 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Sto4g0268 607 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 144 - -
Sto4g0268 607 Pfam Universal stress protein family 19 142 IPR006016 -
Sto4g0268 607 Pfam Protein kinase domain 312 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0268 607 ProSiteProfiles Protein kinase domain profile. 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0268 607 PANTHER OS01G0253100 PROTEIN 15 193 IPR045271 GO:0004714|GO:0006468
Sto4g0268 607 PANTHER OS01G0253100 PROTEIN 255 578 IPR045271 GO:0004714|GO:0006468
Sto4g0268 607 Gene3D Transferase(Phosphotransferase) domain 1 384 568 - -
Sto4g0268 607 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 15 193 - -
Sto4g0268 607 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 255 578 - -
Sto4g0268 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Sto4g0268 607 SUPERFAMILY Protein kinase-like (PK-like) 293 551 IPR011009 -
Sto4g0268 607 Gene3D HUPs 9 149 IPR014729 -
Sto4g0268 607 Gene3D Phosphorylase Kinase; domain 1 272 383 - -
Sto4g0268 607 SMART serkin_6 309 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0268 Sto-Chr4 2030379 2034602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0268 289 547 Trihelix Transcription Factor Family AT1G68690 44.853 3.19e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto4g0268 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0268 - - gmx:100815722 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0268 4 2030379 2034602 Sto4g0268 4 2030379 2034602 ECH
Sto10g0069 10 506809 510940 Sto4g0268 4 2030379 2034602 ECH