Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0254 ATGGGCAGAGAAAGTTCGTCAGAGATGGTAAAGGAAGAAGTCAGTAATGATAGTTCCTCAAATGTTGAGACTGAGGATTTAGATTCGCACTCTCAACATAGTCTTGATAAGGAGACAGGCTCGACAAATTGTCGTGTGTGCCAATGTTCTGAATCTGATAAGAGGGGAGATGCTGCGCTAGAATTTTTGGGCATCACTCCAGTTATAGAAGCACATATAAGTAATGGAGAAGAAAGGTCAGAGAAGGAAATTCCTAAAAGTATGTCTCTTAAAAGAAATGTTGGAAGTAAATCGGGGATAGTGGAGTTTGTAAGCCCTGATGGGGAGGTTTTCCTTTGCAATGCTGATCTGGAAATGGGTTTCTCTCATCAAGACGCTCTAATTGAACTTGGGTGTTGTTGTAAAAGTGATCTTGCTACTGTACACTATGCCTGTGCACTTAAATGGTTTGTCAATCATGGATCTACTGTCtgtgaaatttgtggaaatgtGGCAAAAAATATCAGAGTTGCTGACTTCAATAAGGTTGTTGCTTCTTTGAAAGAGTATGAAGCATTGAGGGAAAGAACTGCTGTCGGGGAACCCAGTCCTGCGCAAGTTCAAGCAAATACTGGTATAGATCCCGATGCTGTGGCTGCTATCCGGAGGCAACGGCTTAGTGAAATTGCACTTTGGTTTTGTCCCCATAATAGCagtaacaataacaacaatgtTGAAACAGTTTCTCAGGTAGTTTCTGAACCACCTTTGAATACGGTTACCGAAGGTGATGCCCCAGTTCAAAATCCTGCAACTAAGTGGGCAGTAGAAGGTACTGGGATCCTGCTTGCTACTGGGCTACTTACTGTCACTCTTGCATGGCTCATAGCTCCTCGGGTTGGAAAGAAAACTGCAAGAAGTGGCCTTCATATCTTACTTGGAGGCATCTGCGCTTTAACAGTTGTGGTTTTCTTCCGCTTTTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGCTACTGGGCAATCTTGTTCATTTTCTGGTTTCTTGTGTTTGGAATATGGGCTTCACGGACACACAGTGCTCATACAACGTGA 1077 0.4197 MGRESSSEMVKEEVSNDSSSNVETEDLDSHSQHSLDKETGSTNCRVCQCSESDKRGDAALEFLGITPVIEAHISNGEERSEKEIPKSMSLKRNVGSKSGIVEFVSPDGEVFLCNADLEMGFSHQDALIELGCCCKSDLATVHYACALKWFVNHGSTVCEICGNVAKNIRVADFNKVVASLKEYEALRERTAVGEPSPAQVQANTGIDPDAVAAIRRQRLSEIALWFCPHNSSNNNNNVETVSQVVSEPPLNTVTEGDAPVQNPATKWAVEGTGILLATGLLTVTLAWLIAPRVGKKTARSGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHSAHTT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0254 358 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 357 - -
Sto4g0254 358 Pfam RING-variant domain 127 161 IPR011016 GO:0008270
Sto4g0254 358 SMART ringv_2 123 162 IPR011016 GO:0008270
Sto4g0254 358 PANTHER ZINC FINGER, RING-CH-TYPE 12 357 - -
Sto4g0254 358 ProSiteProfiles Zinc finger RING-CH-type profile. 105 168 IPR011016 GO:0008270
Sto4g0254 358 MobiDBLite consensus disorder prediction 1 39 - -
Sto4g0254 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 165 IPR013083 -
Sto4g0254 358 SUPERFAMILY RING/U-box 127 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0254 1 348 C3H Transcription Factor Family AT5G08750 62.953 5.38e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0254 - - qsu:112002445 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0254 4 1933643 1936557 Sto4g0254 4 1933643 1936557 ECH