Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0252 ATGGGAGATGGCACTATTGCCACTGCTACAAACCGGTCTAACAGCAGTAACAGTGGAAGTAGCAATAAGCCCGAGTGGTTGCAACAGTACGATCTGATTGGCAAAATTGGGGAAGGCACCTACGGTCTCGTATTCCTCGCGAGGATCAAGTCTCCGACGAATCGCGGAAAATCAATTGCTATCAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACCGCTATCCGTGAAATTATGTTACTCAGGGAGATAACACACGAAAATGTTGTGAAGCTTGTGAATGTTCACATCAATCATGCGGACATGTCCCTGTATCTAGCTTTTGATTATGCTGAACATGACCTTTATGTTATGGGTGAAGGAGAGGAACATGGAGTTATAAAAATTGCTGACTTTGGACTAGCAAGGATATATCAGGCCCCTCTAAAGCCATTATCTGAAAATGGAGTTGTTGTTACCATTTGGTATCGTGCACCTGAACTGCTTCTTGGGGCTAAACATTATACTAGTGCTGTCGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTGACATTGAAGCCACTATTTCAAGGAGCAGAAGTGAAAGCTACACCTAATCCTTTTCAGCTTGATCAACTCGATAAGATATTCAGGGTTTTAGGCCATCCCACATTAGAAAAATGGCCTACCTTAGCATATCTTCCCCATTGGCAACAGGATGTGCAGCATATACAAGGGCACAAATATGACAACACTAGCCTCTGTAATACTGTACACCTACCTCCAAAAAGTCCTGCATATGATCTCTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACAGCAGCACAAGCTTTGGAACATGATGCTCTTGTACCCTGCCAACCTGGAGAGAAAATTGTGAATTATCCTTCTCGTCCAGTTGATACAACTACAGATTTTGAAGGCACAGCCAATTTGCAACCTTCACAACCGGTTTCCTCTGGAAATGCAGTTTCTGGCAGCATAAGTGGTAGATCTGTCGCTCGGCCAATGAATGTTGTTGGCATGCAAAGGATGCCAGCTCAAGCAATGCAAGCTTATAATCTTTCATCCCAGGCAGGGATGGGTGGTGGAATGAATCCTGGTGGAATCCCAATGCCACGAGGTGTCGCCCAGagtgaaggGGAGGTGGGGCCAGCGGAGGCTGATTTTCCTGATGATGCTGTTTACTATGTTATACAGTTGAGAAGGAAAGACGGTGGAATGATGATGCCTGGATACCCTCCGCAACAGAGGTCAAGGCGTAACAACTAA 1296 0.4498 MGDGTIATATNRSNSSNSGSSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSPTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYVMGEGEEHGVIKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFRVLGHPTLEKWPTLAYLPHWQQDVQHIQGHKYDNTSLCNTVHLPPKSPAYDLLSKMLEYDPRKRITAAQALEHDALVPCQPGEKIVNYPSRPVDTTTDFEGTANLQPSQPVSSGNAVSGSISGRSVARPMNVVGMQRMPAQAMQAYNLSSQAGMGGGMNPGGIPMPRGVAQSEGEVGPAEADFPDDAVYYVIQLRRKDGGMMMPGYPPQQRSRRNN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0252 431 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Sto4g0252 431 MobiDBLite consensus disorder prediction 1 23 - -
Sto4g0252 431 PANTHER CYCLIN-DEPENDENT KINASE E-1 18 119 - -
Sto4g0252 431 PANTHER CYCLIN-DEPENDENT KINASE E-1 120 428 - -
Sto4g0252 431 MobiDBLite consensus disorder prediction 311 337 - -
Sto4g0252 431 ProSitePatterns Protein kinases ATP-binding region signature. 36 63 IPR017441 GO:0005524
Sto4g0252 431 PANTHER CELL DIVISION PROTEIN KINASE 120 428 - -
Sto4g0252 431 PANTHER CELL DIVISION PROTEIN KINASE 18 119 - -
Sto4g0252 431 Gene3D Transferase(Phosphotransferase) domain 1 126 289 - -
Sto4g0252 431 ProSiteProfiles Protein kinase domain profile. 1 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0252 431 SUPERFAMILY Protein kinase-like (PK-like) 25 291 IPR011009 -
Sto4g0252 431 Pfam Protein kinase domain 30 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0252 431 Pfam Protein kinase domain 126 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0252 Sto-Chr4 1918629 1925839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0252 23 429 Core Cell Cycle Gene Families AT5G63610 61.975 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Sto4g0252 Pkinase 3.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0252 K02208 - gmx:100813433 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0252 4 1918629 1925839 Sto4g0252 4 1918629 1925839 ECH
Sto3g3243 3 37171564 37177395 Sto4g0252 4 1918629 1925839 ECH