Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0246 ATGAAAGAGGCCTATGTTCTTATATTCTTCACTGTGTTAGGGCTCAGCTATGCAACCACTGGCCCAGATGTGGAAGGTGAAGCTTTGATTGAATTCTTGAAGGCCCTCCATGATTCCAACAATCAAATAACAGACTGGGATAGTCATCTTTTTGTCCATGAATTATGCAGGAGCTTGGATTCAAAAGGATTTTCTGGAACACTTTCTCCTTCAATTACCAAATTGAAATATTTGGTTACCTTGGAATTGCAGAATAACAGCCTTTCTGGGTTCTTACCTGATTACATTGCCAATTTGACACATCTGCAATATCTAAATCTTGCTGACAATAATTTCAATGGCTCTATACCATCCAAATGGGGTCAACTTCCCACTCTGAAGAATCTGGTATTAAGAGGGAACCACTTATCTGGACCCATACCAGATACTATTGCAAATCTTACTGGGTTGTCACAAGTGGATCTTTCTTCTAATGCTTTAACTGGAAGCATCCCGGGCAGACTCTTTTTAGTTCCAACGTTCAACTTTTCAGACACACACCTTCATTCCTCAACCACCAAATCAAAACTTGCAGTAGCTTTAAGTTTTGCAAGTTGTGGTGCATTTGCAATTCTGTGTATTGGGGCTATCTTTTCATATGGATATCATTACATCCAGAGACACAGAAATGATGTCTTTGTTGATGTCTCAGGTGAAGATGAGAGCAAGATTTCCTTTGGGCAATTAAGGAGATTTTCGTGGCGCGAGCTTCAAATCGCGACGAAAAATTTCAGTGAGAGCAATGTGATTGGGCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTCTCAGATAATACAAAGATTGCTGTGAAACGCCTAGCTGATTACCATAATCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTCATAAGTGTTGCAGTTCATCGAAATCTCCTACGCCTAATCGGCTTCTGTACAACCTCAACCGAAAGAATCCTTGTATACCCTTTTATGGAAAATCTAAGCGTAGGGTATCGATTGAGAGATTTGAAACCTGAAGAGAAGGGTTTGGACTGGCCAACAAGAAAGCGAATAGCTTTCGGTACGGCACACGGATTGGAGTACCTACATGAGCAATGCAATCCTAAGATCATACATCGCGATTTAAAGGCTGCAAACATCCTGTTAGATGATGAATTCGAAGCTGTTCTTGGAGATTTCGGGCTGGCTAAGCTGGTTGATACAAGACTGACTTGTGTTACCACTCAGGTGAGAGGCACAATGGGTCATATAGCCCCAGAATACTTGTCCACTGGAAAATCATCAGAGAAAACAGATGTGTTTGGATATGGTATAACCCTTCTTGAGATCGTCACCGGTCAGCGCGCAATCGATTTCTCCCGGCTCGAAGAAGAGGAGGATGTTCTTCTGCTTGATCATATTAAGAAGCTACTGAGAGAGAAGAGGGTGGAAGACATAGTGGATAGGAATTTGGAGAGATATGATGCAAAAGAAGTGGAGACAATAGTTCAGGTGGCATTGCTATGCACACAAGGGTTACCTGAGGATCGTCCAAGCATGTCAGAGGTAGTGAATTTGCTGAATGGAGAAGGTTTAGCAGAGAGATGGAAGGAATGGGAGGAAATTGAAGAGATGAGCAATAGAGAATTCTCACTCTTGGCTCATCAATTTGCTTGGGCTGATGAATCTACTCATGATCAAGAGGCTATTCAGCTTTCAAGAGCAAGATAG 1740 0.4213 MKEAYVLIFFTVLGLSYATTGPDVEGEALIEFLKALHDSNNQITDWDSHLFVHELCRSLDSKGFSGTLSPSITKLKYLVTLELQNNSLSGFLPDYIANLTHLQYLNLADNNFNGSIPSKWGQLPTLKNLVLRGNHLSGPIPDTIANLTGLSQVDLSSNALTGSIPGRLFLVPTFNFSDTHLHSSTTKSKLAVALSFASCGAFAILCIGAIFSYGYHYIQRHRNDVFVDVSGEDESKISFGQLRRFSWRELQIATKNFSESNVIGQGGFGKVYKGVLSDNTKIAVKRLADYHNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVGYRLRDLKPEEKGLDWPTRKRIAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRLTCVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEDVLLLDHIKKLLREKRVEDIVDRNLERYDAKEVETIVQVALLCTQGLPEDRPSMSEVVNLLNGEGLAERWKEWEEIEEMSNREFSLLAHQFAWADESTHDQEAIQLSRAR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0246 579 Gene3D Transferase(Phosphotransferase) domain 1 334 550 - -
Sto4g0246 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Sto4g0246 579 SMART serkin_6 257 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0246 579 ProSiteProfiles Protein kinase domain profile. 257 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0246 579 PANTHER LRR RECEPTOR-LIKE KINASE 7 579 - -
Sto4g0246 579 SUPERFAMILY Protein kinase-like (PK-like) 235 530 IPR011009 -
Sto4g0246 579 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Sto4g0246 579 Pfam Protein kinase domain 258 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0246 579 Gene3D Phosphorylase Kinase; domain 1 226 333 - -
Sto4g0246 579 SUPERFAMILY L domain-like 39 184 - -
Sto4g0246 579 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 579 - -
Sto4g0246 579 Gene3D Ribonuclease Inhibitor 22 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0246 Sto-Chr4 1856439 1860593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0246 1 579 Receptor kinase-like Gene Family AT5G10290 55.810 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Sto4g0246 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0246 - - gmx:100800886 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0246 4 1856439 1860593 Sto4g0246 4 1856439 1860593 ECH