Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0233 ATGGATAAGTACGAGGAGGTCAAGGATTTGGGAGCTGGCAATTTTGGTGTTGCTAGGCTTATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATACATCGAGCGTGGACGCAAGATTGATGAGAACGTGGCCAGAGAGATTATTAACCACAGGTCCCTTCGACACCCCAATATAATTCGATTCAAGGAGgtGGTTTTGACCACCACACATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGGGAGCTATTCGAGAGGATATGCAATGCAGGAAGATTCAGTGAAGATGAGGCAAGATATTTCTTTCAGCAGCTTATCTCTGGTGTCAGTTTCTGTCATTCCATGCAAATATGCCATAGAGATTTGAAGCTCGAAAATACCCTTTTGGATGGAAGCCCTGCACCTCGCTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTGCATTCACGACCCAAATCCACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCTAGGCGAGAATATGATGGCAAGTTGGCCGATGTGTGGTCGTGCGGGGTGACTCTCTATGTTATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGGAATTTCAGGAAAACAATTCAGCGAATAATGGCTGTTCAATACAAAATTCCAGATTATGTTCACATTTCCCAAGATTGCAAACACCTTCTCTCTCGCATATTTGTGGCTAACCCATTGAGGAGAATTACTATCAAGGAAATTAAGAACCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACAGAATCAGCTCAAGCCGTTTATTACCAGAGAGACAACCCAAGCTTTTCTGGTCAAAGTGTAGAAGAGATAATGAGAATTGTAGGAGAGGCAAGGGACCCACCCCCAGTTTGCAGGCCTGTGAAAGCTGGCGGAGAACGAGAACGAGTATCGGCTTCCCGTGACCGCTCCAAAGAGAGTGGTCTAATCAGTGGTCGATTCGGTCTTTCTCCAATCAAACCCAAAGGAGGAAACTCAGATGCAGTCTCTTCATCTTCAGGTCTAGCACAAGCCTTTCCTTTGCGCAATCTTCCAGTCAATGCCATGCAGAAAATGCATAGCAATAGTCACCTAGATTCAGGAACAGCCTGGGACTCTGCTTGCCGAGCATTTCCTTCAACTCTAGATGATACCTCTCCGTTTGGTACATTACTAGGTTTACTAGGTTGTGAACTGGGATGA 1245 0.4506 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTTTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSFCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLRRITIKEIKNHPWFLKNLPRELTESAQAVYYQRDNPSFSGQSVEEIMRIVGEARDPPPVCRPVKAGGERERVSASRDRSKESGLISGRFGLSPIKPKGGNSDAVSSSSGLAQAFPLRNLPVNAMQKMHSNSHLDSGTAWDSACRAFPSTLDDTSPFGTLLGLLGCELG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0233 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Sto4g0233 414 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0233 414 MobiDBLite consensus disorder prediction 303 353 - -
Sto4g0233 414 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sto4g0233 414 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 322 - -
Sto4g0233 414 PANTHER SERINE/THREONINE KINASE 2 322 - -
Sto4g0233 414 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Sto4g0233 414 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Sto4g0233 414 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0233 414 MobiDBLite consensus disorder prediction 310 329 - -
Sto4g0233 414 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0233 414 CDD STKc_SnRK2 3 259 - -
Sto4g0233 414 SUPERFAMILY Protein kinase-like (PK-like) 1 296 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0233 Sto-Chr4 1747950 1754723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0233 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 42.517 1.77e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto4g0233 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0233 K14498 - gmx:547968 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0233 4 1747950 1754723 Sto4g0233 4 1747950 1754723 ECH