Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0229 ATGGGTAGATCTCCTTGCTGTGAGAAAGAGCACACCAACAAGGGAGCTTGGACCAAAGAAGAAGACCAACGCCTCATCAATTACATCAAACTCCACGGCGAAGGTTGCTGGCGCTCTCTTCCCAAAGCCGCCGGTTTGCTGAGATGTGGCAAGAGCTGTAGACTCCGATGGATCAATTACCTGAGACCTGATCTCAAGAGAGGCAACTTCACTGAACAAGAAGACGAACTCATCATTAACCTCCATAGCTTACTAGGAAACAAATGGTCGCTGATAGCTGCGAGGCTACCGGGACGAACCGACAACGAGATCAAGAACTACTGGAACACCCACATCAAGCGCAAACTCTACAGCCGCGGGATCGACCCTCAAACCCATCGGCCACTAAACGCCGTCGTTTCCAaagacaacaacaataataacaataatgttGCTTCGAAGACGATGATGGTACTGGCAACCGACTCggccggtggtggtggtgaagaTTCATCAAATAGCAGCAGTGGACCTCTCCATTGGCCTTCCTTCTTCTAA 537 0.46 MGRSPCCEKEHTNKGAWTKEEDQRLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAVVSKDNNNNNNNVASKTMMVLATDSAGGGGEDSSNSSSGPLHWPSFF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0229 178 CDD SANT 69 112 IPR001005 -
Sto4g0229 178 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Sto4g0229 178 CDD SANT 16 61 IPR001005 -
Sto4g0229 178 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto4g0229 178 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto4g0229 178 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto4g0229 178 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto4g0229 178 Gene3D - 68 149 - -
Sto4g0229 178 MobiDBLite consensus disorder prediction 159 178 - -
Sto4g0229 178 PANTHER TRANSCRIPTION FACTOR MYB7 1 146 - -
Sto4g0229 178 SMART sant 13 63 IPR001005 -
Sto4g0229 178 SMART sant 66 114 IPR001005 -
Sto4g0229 178 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto4g0229 178 Gene3D - 14 66 - -
Sto4g0229 178 MobiDBLite consensus disorder prediction 154 178 - -
Sto4g0229 178 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto4g0229 178 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0229 Sto-Chr4 1723008 1723980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0229 1 166 MYB Transcription Factor Family AT2G16720 72.289 4.23e-88 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto4g0229 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0229 K09422 - pvy:116145632 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0229 4 1723008 1723980 Sto4g0229 4 1723008 1723980 ECH