Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0226 ATGGTGACAACAGTAGTGACGGATGGTGGTGTGATGACGACGACAATGGTTAGCAGGAATGGGAGAATGAAGAAATCCAACACACCCTCTTTCCTTCCCCCGAAACCCGCGTGGGTTCTCCCCTATCGAACCCAGAACCTCACCGAGCTTTACACATTTGGAAGGAAATTAGGTCAGGGTCAATTTGGTACAACTCATCTCTGCGTAGAAAAGTCCACTGGTCTTCGATATGCCTGCAAGTCAATCCCTAAGCGCAAGCTAATCTGCAAGGAGGATTACGACGACGTTTGGAGGGAGATTCAGATTATGCACCATTTGTCCGAACACCCTCACGTCGTCAGAATCCATGGCACCTATGAGGACCCCTTCTCTGTTCATTTGGTCATGGAGATCTGTGAAGGTGGAGAGTTGTTCGATAGGATCGTACAGAAGGGGCATTATAGTGAGAGGCAAGCGGCTAAGTTGATTCGGACTATTGTTGAGGTGGTTGAGACTTGTCATTCTCTTGGGGTCATGCATAGAGACCTTAAGCCAGAGAATTTCTTGTTCGATAGTGTTGAGGAAGATGCTAAACTTAAAGCCACTGATTTCGGATTGTCTGTTTTCTACAAGCCAGGTGAAACCTTTTCAGATGTTGTTGGGAGCCCATACTATGTTGCACCAGAGGTGTTGCGCAAGCATTATGGACCTGAATCGGATGTGTGGAGTGCTGGGGTTATTTTGTACATCTTATTAAGTGGGGTGCCACCATTTTGGGCGGAAACTGAAATGGGGATCTTCAGACAGATCTTAGaaggaaaacttgattttcagtCTGAACCATGGCCTTGCATTTCAGAAAGTGCTAAGGATCTAATTAGAAAAATGCTCGATCAAAATCCGAGAAAGAGGCTTACAGCCCATGAAGTACTCAGCCATCCATGGATAGTTGATGACAACATTGCACCTGATAAACCTCTTGACTCTGCTGTTTTATCACGCCTGAAGCAGTTCTCTGCAATGAATAAGCTTAAAAAGATGGCTTTGCGTGTTATTGCTGAAAGGCTCTCTGAGGAAGAAATTGGTGGCTTGAAGGAGTTATTCAAAATGATTGATACAGACAGCAGTGGAACCATAACTTTTGATGAGTTAAAGGATGGCTTGAAGCGAGTAGGGTCCGATCTTATGGAGTCTGAAATCAAGGATCTTATGGAAGCAGCGGATATTGATAATAGTGGAACAATTGACTATGGTGAATTCATTGCTGCTACTGTCCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCTGCATTCTCTTACTTTGATAAAGATGGTAGTGGTTACATAACCATTGATGAGATTCAACAAGCTTGTAAGGACTTCGGCTTAGGCGATGTCCATATTGATGAAATGATCAAAGAAATTGATCAAGACAACGATGGGCAAATAGATTATGGTGAATTTGCTGCAATGATGAGGAAGGGAAATGGAGGGATTGGAAGGCGAACCATGAGAAACACATTAAATCTAAGAGATGCCCTGGGATTGATAGGAAAGGGGTCTAATGAAGTTATTGATGGTTAG 1569 0.4315 MVTTVVTDGGVMTTTMVSRNGRMKKSNTPSFLPPKPAWVLPYRTQNLTELYTFGRKLGQGQFGTTHLCVEKSTGLRYACKSIPKRKLICKEDYDDVWREIQIMHHLSEHPHVVRIHGTYEDPFSVHLVMEICEGGELFDRIVQKGHYSERQAAKLIRTIVEVVETCHSLGVMHRDLKPENFLFDSVEEDAKLKATDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPESDVWSAGVILYILLSGVPPFWAETEMGIFRQILEGKLDFQSEPWPCISESAKDLIRKMLDQNPRKRLTAHEVLSHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDSSGTITFDELKDGLKRVGSDLMESEIKDLMEAADIDNSGTIDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQQACKDFGLGDVHIDEMIKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRNTLNLRDALGLIGKGSNEVIDG 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0226 522 SUPERFAMILY EF-hand 348 489 IPR011992 -
Sto4g0226 522 Pfam Protein kinase domain 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0226 522 ProSiteProfiles EF-hand calcium-binding domain profile. 462 493 IPR002048 GO:0005509
Sto4g0226 522 ProSitePatterns Protein kinases ATP-binding region signature. 57 90 IPR017441 GO:0005524
Sto4g0226 522 PANTHER BNAA09G05220D PROTEIN 37 501 - -
Sto4g0226 522 ProSiteProfiles EF-hand calcium-binding domain profile. 388 423 IPR002048 GO:0005509
Sto4g0226 522 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Sto4g0226 522 Gene3D - 350 421 - -
Sto4g0226 522 Gene3D - 422 522 - -
Sto4g0226 522 ProSiteProfiles EF-hand calcium-binding domain profile. 352 387 IPR002048 GO:0005509
Sto4g0226 522 CDD EFh 357 416 IPR002048 GO:0005509
Sto4g0226 522 ProSitePatterns EF-hand calcium-binding domain. 365 377 IPR018247 -
Sto4g0226 522 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Sto4g0226 522 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Sto4g0226 522 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Sto4g0226 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Sto4g0226 522 SMART efh_1 356 384 IPR002048 GO:0005509
Sto4g0226 522 SMART efh_1 462 490 IPR002048 GO:0005509
Sto4g0226 522 SMART efh_1 392 420 IPR002048 GO:0005509
Sto4g0226 522 SMART efh_1 428 456 IPR002048 GO:0005509
Sto4g0226 522 Gene3D Transferase(Phosphotransferase) domain 1 138 349 - -
Sto4g0226 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 501 - -
Sto4g0226 522 Gene3D Phosphorylase Kinase; domain 1 53 137 - -
Sto4g0226 522 SUPERFAMILY Protein kinase-like (PK-like) 30 332 IPR011009 -
Sto4g0226 522 SMART serkin_6 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0226 522 Pfam EF-hand domain pair 357 417 IPR002048 GO:0005509
Sto4g0226 522 Pfam EF-hand domain pair 427 488 IPR002048 GO:0005509
Sto4g0226 522 CDD EFh 429 488 IPR002048 GO:0005509
Sto4g0226 522 ProSiteProfiles Protein kinase domain profile. 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0226 522 CDD STKc_CAMK 51 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0226 Sto-Chr4 1682350 1693485 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0226 33 518 EF-hand Containing Proteins AT1G35670 76.892 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto4g0226 Pkinase 4.5e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0226 K13412 - gmx:100806678 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0226 4 1682350 1693485 Sto4g0226 4 1682350 1693485 ECH