Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0194 TTGGCACCAACTTCTCCATCTGTTGCTAAATCCTCTGGATACAAGATGGATGATAGTCGTCAGCATGAAAACAGTAGACAGAAGATGGACTACTACCGAGGAGCACCTTCACTGTGGAGTATGGCTCCCCAGCATCAGGTAAAGGAACCAAATGCCCTAGTTATGAATAAGAAAATTATGTCCATTATAGCTGAGAGGGAGGCTGCCATTCAAGCGCGAAATTCAGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTAATGGAACGTGATAATGCCCTTGCTGCCCTTCAAATCCAGGACAATGCTGTCAACTTCTCATTGGGTAGTGGTATTCAACGTGGATCAAAGCGGATGCACCATGCCTCAAATCATTTAGGTCACATGGCAGAAGCTGCTTACAACACAAAGGATTTGGGCATAACTGATGCCTTCCCAGTAACTGCTATAACTTCTGAGGAAGTCAAGTCTCATCAGGCTAAGAGAACAAAGGAGAACAAGGCAGTTTCTTCCAAAGCATCAAAGCCACCAGGCAAAGGGAAGAAAGTGAGCGAGGACTTAAATAGGCGGGCTTCGTCTGAAGGGACAAAGATCAAATCTGAGTGGGATAGGCAGGATGTTGGTTTGAACTTGGTTGCGTTTGATGAAAATACCATGCCAGTCCCAGTTTGCACATGTACCGGAGTACCAAGGCCTTGCTACAAATGGGGGAATGGTGGATGGCAGTCATCATGTTGTACCACAACCTTGTCAATGTATCCATTACCCCAGCTTCCAAACAAGCGCCATGCCCGAGTTGGAGGGAGAAAGATGAGCGGAAGTGTCTTTACAAGACTGCTTAGTAGGGTGGCCGCAGAAGGCCGCGATTTATCTATTCCAGTGGATCTCAAGGACTACTGGGCCCGACATGGAACAAATCGCTACATCACAATCAAGTAG 993 0.4723 LAPTSPSVAKSSGYKMDDSRQHENSRQKMDYYRGAPSLWSMAPQHQVKEPNALVMNKKIMSIIAEREAAIQARNSALSEKNEALAARDEALRQRDEALAQRDNALMERDNALAALQIQDNAVNFSLGSGIQRGSKRMHHASNHLGHMAEAAYNTKDLGITDAFPVTAITSEEVKSHQAKRTKENKAVSSKASKPPGKGKKVSEDLNRRASSEGTKIKSEWDRQDVGLNLVAFDENTMPVPVCTCTGVPRPCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAEGRDLSIPVDLKDYWARHGTNRYITIK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0194 330 MobiDBLite consensus disorder prediction 173 187 - -
Sto4g0194 330 Coils Coil 80 107 - -
Sto4g0194 330 MobiDBLite consensus disorder prediction 1 26 - -
Sto4g0194 330 Pfam GAGA binding protein-like family 16 330 IPR010409 -
Sto4g0194 330 PANTHER - 16 330 IPR010409 -
Sto4g0194 330 SMART GAGA_bind_2 16 330 IPR010409 -
Sto4g0194 330 MobiDBLite consensus disorder prediction 196 217 - -
Sto4g0194 330 PANTHER PROTEIN BASIC PENTACYSTEINE4 16 330 - -
Sto4g0194 330 MobiDBLite consensus disorder prediction 172 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0194 Sto-Chr4 1458021 1459129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0194 16 330 BBR or BPC Transcription factor family AT2G21240 59.306 3.73e-133 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sto4g0194 GAGA_bind 8.7e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0194 - - jre:108986984 524.242