LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto4g0186	ATGAGCTGCTGCACAAGATGGAACACTTCCATTTCCATGGCTGCTGTACTGTTGCTTCAGCTTATTAGCTTTCCTATGGCCATCTTCTCTCACCCAGACAGGATCCTTCGTCTTCCAGGACAACCCCACGTGGGATTCCAACATTTCTCAGGATATGTCACAGTGGATCAAAAGAAACACAAGTCTTTGTTCTACTACTTTGTTGAATCCCAAACTCTTCCTGCTTCTAAGCCTCTTGTCCTCTGGCTCAATGGAGgaCCTGGTTGTTCTTCTCTGGGTGTAGGAGCATTCTCTGAGAATGGACCTTTTAGACCAAATGGACaagttttgattcaaaatgAGTATAGCTGGAACAGAGAGGCAAATATGCTGTATCTGGAGACACCAATTGGAGTGGGGTTTTCTTATGCTGAAGGTGGATCTTCCTATATGACAGTAAACGATGAAGCCACTGCCAGGGACaatcttttgtttttgaaaCTATGGTTCAACAAGTTCCCTCAATACAAGCAAAGAGATTTGTTTCTCACTGGGGAAAGCTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATCAACAAGAAGGAGAAGATATTTAATCTTAAAGGCGTAGCTTTGGGTAACCCAGTTCTAGAATATGCCATAGATTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACCTACAAAATGTTCACCACTGTGTGTAATTATTCTAGGTATGTTAGTGAGTACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTCATGGGACAAGTAAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTTTCGCAGTCCAAGGTTATCTGTCCTCAAACCCAAAAGGCAAATGAGAGGATAGATGTGTGTGTTgatgacaaagttacaaattactTGAACCGTAAAGATGTACAAGAGGCACTTCATGCCAAACTAGTTGGAGTTCGCAAGTGGGATGTTTGTAGCAACATTCTGGACTATGATATGCTCAATGTGGAAATACCCACACTCCCTATTGTTGGATCACTAGTAAAAGCTGGAGTTCAGGTCCTTATTTACAGTGGAGATCAAGATTCTGTAATTCCACTTACTGGAAGCCGTAGCTTGGTTCAAAAACTTGCAAGAAAATTAGCACTGAATACTACTGTTCCTTACAGAGTTTGGTTTGAAGGCcaacagGTTGGTGGGTGGACTCAAGTGTATGGAAATATACTGTCATTTGCAACAGTGAGAGGTGCCTCCCACGAGGCTCCTTTCTCACAGCCTGAGAGATCTTTGACTCTATTCAAGTCATTCTTGGAAGGAAGGCCTCTACCAGCTGAGATTTTCTGA	1404	0.4081	MSCCTRWNTSISMAAVLLLQLISFPMAIFSHPDRILRLPGQPHVGFQHFSGYVTVDQKKHKSLFYYFVESQTLPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGQVLIQNEYSWNREANMLYLETPIGVGFSYAEGGSSYMTVNDEATARDNLLFLKLWFNKFPQYKQRDLFLTGESYAGHYVPQLAKLMIEINKKEKIFNLKGVALGNPVLEYAIDFNSRAEFFWSHGLISDSTYKMFTTVCNYSRYVSEYYRDSVSPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQTQKANERIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYDMLNVEIPTLPIVGSLVKAGVQVLIYSGDQDSVIPLTGSRSLVQKLARKLALNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLTLFKSFLEGRPLPAEIF	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto4g0186	467	Pfam	Serine carboxypeptidase	40	459	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	28	464	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	Gene3D	alpha/beta hydrolase	30	291	IPR029058	-
	Sto4g0186	467	PANTHER	CARBOXYPEPTIDASE	28	464	-	-
	Sto4g0186	467	Gene3D	-	314	350	-	-
	Sto4g0186	467	Gene3D	-	360	459	-	-
	Sto4g0186	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	113	125	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	126	136	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	162	187	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	PRINTS	Carboxypeptidase C serine protease (S10) family signature	429	442	IPR001563	GO:0004185\|GO:0006508
	Sto4g0186	467	ProSitePatterns	Serine carboxypeptidases, histidine active site.	429	446	IPR033124	GO:0004185
	Sto4g0186	467	ProSitePatterns	Serine carboxypeptidases, serine active site.	176	183	IPR018202	GO:0004185
	Sto4g0186	467	SUPERFAMILY	alpha/beta-Hydrolases	37	463	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto4g0186	Sto-Chr4	1372783	1376052	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto4g0186	322	462	Calmodulin-binding Proteins	AT2G22960	28.369	2.75e-16	75.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto4g0186	K16297		-	gmx:100795668	808.905