Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0163 ATGGCAGATTCAAAAGCTTCAAACTTTGAGTTTCAAGTGAAGCAAGGAGAGCCAACTCTGGTTCCACCAGCAGAGGAAACAGAGAAGGGCTTCTACTTCCTCTCAAATCTTGACCAGATCACAGCAATCCCAGTTCGAACAGTTTACTGTTATAAATCTGATTCAAGAGGAAACGAGGATGCTGCAACAGTTATTAAGGATGCCTTGTCCAAGATTCTTGTTCCTTATTACCCCATGGCTGGAAGGTTGTGTATTAGTGCTGAGGGAAAGCTGATAGTGGATTGTACAGGGGAAGGTGCTGTGTTTGTTGAGGCTGAAGCAAACTGTGAGATTGAGCAATTGGGAGACTTGACAAAACCTGATCCTTCCATTCTTGGAAAACTTGTTTATGTTGTCCCTAATGCCAGCAGCATACTTGAGATGCCTCTCATGGTGGTTCAGGTAACAAAGTTTAAGAATGGAGGATTTACTGTGGGGCTGAGCATGAACCACTGTATGAAAGATGGACTATGTGCTATGGAATTTGTGAATGCATGGAGCGAGACAGCAAGAGGCTTAGACTTGAAAATTCCACCATTCCTAGACCGAACTATTCTCAAAGCACGAAATCCTCCCAAAATAGAATTCCCCCACCATGAATTTGCTGAGATTGAAGACATATCCAACACCAAAAAACTCTACGAGGAAGAACACATGCTATACAAGTCCTTCTCTTTTGATGCACACAAGCTTGCATTGCTCAAGAAAAAAGCCATGGAAGATGGGGTTCTTGAGAAATGCACATCTTTTGAAGCCCTCTCTGCCTTTGTATGGAGAGCTCGAAGTGAAGCCTTGAGGATGCATCCTGACCAACAAACCAAGCTCCTCTTTACAGTCGATGGACGGTCCAGATTCAACCCCCCAATACcggaagggtattttgggaatgCCATTATGCTGACAAATTCACTGTGTAAGGCAGGGGAATTACTGAATAACCCTTTATCTTTCACTGTGGGGTTAGTGAGGAAGGCCATTGATATGGTCACAGATAGCTACATGAGATCGTCCATTGACTTCTTTGAAGAAAGAAGAGTTAGGCCCTCTTTAACCGCAACACTTGTGATCTCAACATGGGCAAGATTGTCTTTTCACACCACAGATTTTGGGTGGGGACAACCTTTGTGTTCTGGACCTGTGACATTGCCTGAGAAAGAGGTTGTTCTGTTCTTATCACAGGGTGGAGGGAAGAAGAACATTGATGTTCTTCTGGGATTGCCTGCTTCTGCCATGGAAATCTTTGAACATCTCATGCACTTCTGA 1302 0.4316 MADSKASNFEFQVKQGEPTLVPPAEETEKGFYFLSNLDQITAIPVRTVYCYKSDSRGNEDAATVIKDALSKILVPYYPMAGRLCISAEGKLIVDCTGEGAVFVEAEANCEIEQLGDLTKPDPSILGKLVYVVPNASSILEMPLMVVQVTKFKNGGFTVGLSMNHCMKDGLCAMEFVNAWSETARGLDLKIPPFLDRTILKARNPPKIEFPHHEFAEIEDISNTKKLYEEEHMLYKSFSFDAHKLALLKKKAMEDGVLEKCTSFEALSAFVWRARSEALRMHPDQQTKLLFTVDGRSRFNPPIPEGYFGNAIMLTNSLCKAGELLNNPLSFTVGLVRKAIDMVTDSYMRSSIDFFEERRVRPSLTATLVISTWARLSFHTTDFGWGQPLCSGPVTLPEKEVVLFLSQGGGKKNIDVLLGLPASAMEIFEHLMHF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0163 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 432 - -
Sto4g0163 433 Gene3D - 217 432 IPR023213 -
Sto4g0163 433 Gene3D - 7 216 IPR023213 -
Sto4g0163 433 Pfam Transferase family 15 431 - -
Sto4g0163 433 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 12 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0163 Sto-Chr4 1198119 1199704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0163 19 431 Monolignol Biosynthesis Gene Families AT5G48930 36.977 1.70e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0163 K15400 - gmx:100794490 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0163 4 1198119 1199704 Sto4g0163 4 1198119 1199704 ECH