Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0142 ATGGCACAGATCTCCTTTGATCCTACTTCTCACATTCATCCAGAGACTCTTTCAATTCGAAATGGGGGTCCTGGTGTCTCCTCATCCACCACAAATACGGTCTTGCCACAGCAACCAGCTCCAAAAAAGCCAACAAGACAATGGGCTGCTTGGACTCGTGAAGAGGAGGAAAGTTTCTTCACTGCATTACGACAAGTTGGCAAGAATTTCGAGAAGATCACTTGCCGTGTGCAAAGTAAAAACAAGGATCAGGTTAGGCATTATTACTATCGGCTTGTGAGACGGATGAACAAACTTCTTGGTCCTGGATTGTGTTTGGATGCCAAAAACTCTAAAGACACGAATGCTGCAATGCTTCGCTGGTGGTCTTTGTTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCTCGAAGGTTCAAAATATTTGTAGAGGCCTTGGAGCATCAACTTTTGAAAGATCGAAAGAAAAGTGTGCGGAAGAGACCCTTGCAGGGGGAAAATTGTCCTCCTGCTGCTACCAATAATGTCTCAAATCAAAGTAGAGCATTGGGAAATGATGCTCAGACAGTTAAACTGGTTCTTGTTGACagtcaaaatattcaaaaccTAGGACCTTCAAAAGCATCATTGAAACGCAATATAAACATGGGTGTTAATCGTAGTAACACTAAGGGAGATTCAACTACCATGAAACCTTCAAGACAACGAAAGAAACCAGGTACGATCACAGCAGCAGCATATAAAAAATGGGAGAAGGCTGCAATTGCTGGTGTTTCTTTAGTTGCAGATGCTGCTGAGCATTTAGAACGGGCTTCCACTGTTAAAGAGGTTATACAAGACCAGGAGATTCGAGGAGAAAAATGTTCTGAACCTGTTGGTAATGTTCTACCGCCAGTGCCTACTTTTCCTCAAAATCACCTTGTTGATAACAATGTACAGAATATTATGAAACTTAAGCTCCAGTTATTCCCAATTGATGATTGTACTCGAAGAGCCTTGGAAATGCACAACCCCTACCTGGAGCTTACTCTTAGTACTCGAAAAAGGATATCATCAATTTTAGAACATCTGAACCGTAAATGGGGCAATTCAAGCATAGCTGTTGGAGAGTTAATGCTTTTTCCTTATAATATTCaaagggaaaatttagctagttTTCAGAGATGGACACAAGAATCTACGGTTAGTGCAGGAGATGTATGTGAAATGATTGGACGTCCGCTCATATTCCGTTTAAGGTATGGATGGTTTTCTAGTAATGAACTTCGGTCACTAAATAATCAAGTGCCTATGGCATCTAGCTGCATGCTTGGACAGTCCAACATTAACATGGGCAATACAAACGGTTGCATTGTGGATTCAGCTTTGCTTCCTACAACTTCAACACCAGCAAATAATTATTCCATGGATCTATCTGAAAATCAAGGAACATCCACAACCAAAGATGTTGCTCCTACCACCACTTCAATTGATTTGCCTCATGAAAGAGATGATAGTATTTACCTGAGTCCAAACATTAAGGAGTCCAGTGATCCGACGCTCAATGTAGGAGCAGATGCTAGGGATCAAATTATGACAAGACAAATGGAAGAGATGGTGAAACTGCACATGTTCATACCTCAGCATGCTGTATTTTTATTCTATGTTTGTTATAACATAGCATCTCTGTATTTTGTTATTATACTTGTAAACTGTGTTATTGACGGTCATTTGGATGAGTTGAGATTAAGCAATGGAACAGGGTTTTCAGCTGGTGAGTGGGCTGATAGCCTTACCAACATTAGTGTTGGGGACCTACTTTCAGGAGTGTCCCAGGATCTGGAAGATAACTGCATTGATCCACCTATTGCTGAGAACCGTAATTGTCTTCCACAAATTCCTTTTAGCAGTGATTCTTTTGATGCTGCTATTGCTGCCCACATATCTCGACATCAAGACAAGATGGGACATCAACCAACTTTGGCATCCCATACATCTTCCATCTGGGATGCTGAAGAAACATGTGAtgcttttttgtttaaaaagaaTCCTATTCCTCATGAAGACGGTCCTCATTTATCTCTCATCAACACTATAGAACCTCACAAACAGTTTCCTGGAAGAAGCTCTGAGTACTCTGAGAATTTAGTTAAGCAGCAATCTCCGGAAAAAGAGAGGCTTGTAGATGATTTTGCTCATACAGATCCTGTAGACGGTTTAGAATCTGAGGTGGATTTCCAGGATCACTCAGCAAAGGATTTCAGTGCGCTAGCAGATATGTATTGGcctgattctttgggaccactGGATTTGGATATACCATCAACCAAGTACCATAGCGAAGATCTAATTTTTAGTGACAGTCTTAGTGGTTTGAATCGCCTAATAGCGAGCAGTCTGGATGCGTTCCAGAATTGCTCCTTTTTTGGTTTTGACAAGAAGGAATCATCATGA 2442 0.4005 MAQISFDPTSHIHPETLSIRNGGPGVSSSTTNTVLPQQPAPKKPTRQWAAWTREEEESFFTALRQVGKNFEKITCRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFVEALEHQLLKDRKKSVRKRPLQGENCPPAATNNVSNQSRALGNDAQTVKLVLVDSQNIQNLGPSKASLKRNINMGVNRSNTKGDSTTMKPSRQRKKPGTITAAAYKKWEKAAIAGVSLVADAAEHLERASTVKEVIQDQEIRGEKCSEPVGNVLPPVPTFPQNHLVDNNVQNIMKLKLQLFPIDDCTRRALEMHNPYLELTLSTRKRISSILEHLNRKWGNSSIAVGELMLFPYNIQRENLASFQRWTQESTVSAGDVCEMIGRPLIFRLRYGWFSSNELRSLNNQVPMASSCMLGQSNINMGNTNGCIVDSALLPTTSTPANNYSMDLSENQGTSTTKDVAPTTTSIDLPHERDDSIYLSPNIKESSDPTLNVGADARDQIMTRQMEEMVKLHMFIPQHAVFLFYVCYNIASLYFVIILVNCVIDGHLDELRLSNGTGFSAGEWADSLTNISVGDLLSGVSQDLEDNCIDPPIAENRNCLPQIPFSSDSFDAAIAAHISRHQDKMGHQPTLASHTSSIWDAEETCDAFLFKKNPIPHEDGPHLSLINTIEPHKQFPGRSSEYSENLVKQQSPEKERLVDDFAHTDPVDGLESEVDFQDHSAKDFSALADMYWPDSLGPLDLDIPSTKYHSEDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKESS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0142 813 MobiDBLite consensus disorder prediction 1 40 - -
Sto4g0142 813 ProSiteProfiles SANT domain profile. 51 97 IPR017884 -
Sto4g0142 813 Pfam Myb-like DNA-binding domain 50 92 IPR001005 -
Sto4g0142 813 MobiDBLite consensus disorder prediction 220 242 - -
Sto4g0142 813 MobiDBLite consensus disorder prediction 1 45 - -
Sto4g0142 813 ProSiteProfiles Myb-like domain profile. 43 93 IPR001005 -
Sto4g0142 813 MobiDBLite consensus disorder prediction 473 492 - -
Sto4g0142 813 Gene3D - 25 100 - -
Sto4g0142 813 SMART sant 47 95 IPR001005 -
Sto4g0142 813 MobiDBLite consensus disorder prediction 159 181 - -
Sto4g0142 813 MobiDBLite consensus disorder prediction 473 490 - -
Sto4g0142 813 PANTHER CRAMPED PROTEIN 37 798 - -
Sto4g0142 813 CDD SANT 50 93 IPR001005 -
Sto4g0142 813 SUPERFAMILY Homeodomain-like 42 97 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0142 Sto-Chr4 1092180 1096834 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto4g0142 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0142 - - aprc:113857455 1106.66