Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0103 ATGGCAAacaattcccaaacaaaccctatcCATAACATCGACCCAAATACTGGCTTTTGCTCTCAAACCCGAATCTTCCATAGTCTCCGTCCAAACATCCCCCTCCCTCCTCCCTCTCTACCTCTCTCCATCGCCCACTacgctctctctctcctccctcCCGCCACCGCCGCTTCCACCACCCCCGTCCTCATCGACTCCCTCACCGGTCGCCACGTGTCCTACTCCCTCTTCCTTCACCAAATCAAAACCCTCTCTTCCTCCCTCCTCTCTCTCGCCCCTCTCTCCAAAGGCCACGTCGCCTTCATTCTCGCCCCTTCTTCTCTTCACATTCCCCTTCTCTACTTCTCCTTACTCTCCTTAGGACTCACCATCTCACCCGCTAACCCACTCGGATCTGACTCGGATGTGACTCACCAGGTCCGACTCACTAAACCCGTCATCGCCTTCGCTACCTCCTCCACTTCTCACAAGATCCCCAACCTTCCATACGGCACCGTTTTGATCGACTCGCCTCACTTCCTCTCCATGATCGATGGAACTTCCGGAAGTTTCGATAGTGATAACGATCCGGTCGAAGTGAGTCAATCCGAGACGGCGGCGATTCTTTTCTCTTCCGGCACCACAGGCCGAGTCAAGGGGGTTTCGTTGACTCACAGGAATTTTATCGCTCTAATCGGAGGCATTTATCACCTGAGACACAATCACAACGACGAATCACGCCATGTGTCCTTGTTCCCTTTGCCTCTGTTTCACGTGTTCGGATTTTTCGCATTGGTTTCGGCGATAGCATTTGGGGGAACTTTGGTGATGATGCAGAGGTTCGATTTTGATGGCATGCTGAAGGCGGTGGAAAGGTACAGAATCACGCGCGTGCCGGTGGCGCCGCCGCTTGTGGTGGCGCTGACGAAGTCGGAGTTGGTGAATAGGTACGACCTTAGCTCGCTGAGGTTGCTGGGGTGCGGCGGCGCGCCGCTTGGGAAGGAGGTGGCGGAGAATTTCAAAGCCAAATTCCCCAATGTGGAAATTCTGGAGGGGTATGGTTTAACTGAGAGTGGGGGTGCAGTATCGAGAATGGTAGGAGGTGATGAGGCTAAGCGTCATGGTTCAGTGGGACGGCTAGAACATAGTATGGAAGCAAAGATAGTGGATCCTGTATCTGGAGAAGCGTTACTTCCTTCCCAGAAAGGTGAATTGTGGTTGCGAGGTCCAACAATTATGAAAGGTTATGTGGGAGATAAGAAGGCAACAGCAGAAACATTGGATTCAGAAGGGTGGCTTAAGACAGGGGATCTTTGTTATTTCGACTCTCATGGTTTCTTATTCATTGTGGACAGGCTAAAGGAATTGATTAAATACAAAGCATACCAGGTTCCCCCAGCTGAGTTAGAACATTTACTTCTCTCCAATCCTCACATTGCTGATGCTGCTGTAATTCCGTACCCTGATGAAGATGCAGGGGAAATACCAATGGCATTTGTGGTAAGAAAGCGTGGAAGCAATATTAGTGCATCTATGGTTATGGATTTTGTGGAAAAGCAGGTTGCACCATACAAGAAGATAAGGCGTGTATGTTTTGTGGAGTTGATACCAAAGTCTCCTGCAGGCAAAATCTTGAGAAGGGAATTAGCTGCCTATGCTCTCTCTACTGCTTCTTCCAAATTGTGA 1668 0.4898 MANNSQTNPIHNIDPNTGFCSQTRIFHSLRPNIPLPPPSLPLSIAHYALSLLPPATAASTTPVLIDSLTGRHVSYSLFLHQIKTLSSSLLSLAPLSKGHVAFILAPSSLHIPLLYFSLLSLGLTISPANPLGSDSDVTHQVRLTKPVIAFATSSTSHKIPNLPYGTVLIDSPHFLSMIDGTSGSFDSDNDPVEVSQSETAAILFSSGTTGRVKGVSLTHRNFIALIGGIYHLRHNHNDESRHVSLFPLPLFHVFGFFALVSAIAFGGTLVMMQRFDFDGMLKAVERYRITRVPVAPPLVVALTKSELVNRYDLSSLRLLGCGGAPLGKEVAENFKAKFPNVEILEGYGLTESGGAVSRMVGGDEAKRHGSVGRLEHSMEAKIVDPVSGEALLPSQKGELWLRGPTIMKGYVGDKKATAETLDSEGWLKTGDLCYFDSHGFLFIVDRLKELIKYKAYQVPPAELEHLLLSNPHIADAAVIPYPDEDAGEIPMAFVVRKRGSNISASMVMDFVEKQVAPYKKIRRVCFVELIPKSPAGKILRRELAAYALSTASSKL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0103 555 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Sto4g0103 555 Gene3D - 38 448 IPR042099 -
Sto4g0103 555 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 26 544 - -
Sto4g0103 555 SUPERFAMILY Acetyl-CoA synthetase-like 64 549 - -
Sto4g0103 555 CDD 4CL 55 543 - -
Sto4g0103 555 Gene3D - 449 550 IPR045851 -
Sto4g0103 555 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Sto4g0103 555 Pfam AMP-binding enzyme 61 453 IPR000873 -
Sto4g0103 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0103 Sto-Chr4 844420 847737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0103 5 555 Monolignol Biosynthesis Gene Families AT5G63380 58.185 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0103 K01904 - gmx:100777435 754.207