Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0096 ATGGCCGACTCCATCGACCCAAACAGTGGCTTCTCCTCTCAATCCAGAACCTTCCACTCTCTCCGTCCAAACGTCCCTCTCCCTCCTCCCTCTCAACCCCTCTCCATCACCAACTATGCTCTCTCTCTCATCCCCTCCACCGCCTCCTCCACCACCGTCCTCATCGACTCCACCACCCACCGCCGCCTCTCCTACTCCCTCTTCCTCCGCCAAGTCCAAAACCTCTCTTCCTCCCTCTCTTCCCTCACCCCTCTCTGCAAAGGCCACGTCGCCTTCATTCTCTCTCCTCCCTCCCTCCACATTCCCGTTCTCTACTTCTCCCTCTTGTCCCTAGGCGTCACCGTCTCTCCCGCTAACCCAATCGGCTCCCACTCCGAGGTCGCTCACCAGGTCCAACTCGCTCAACCCGTAATCGCCTTCGCTACCTCCAATACTGCCCACAAGATCCCCAAACTTCAATACGGCACCGTTTTGATCGACTCGCCTCTCTTTCTCTCCATGCTGGAGGGGACTCGGGATTCCGGTGCCGGGAGAGCTCCGATCGTGCGTCAATCCGACACGGCGGCGATTCTCTTCTCTTCCGGAACCACCGGGAAGGTGAAGGGCGTGATGCTGAGTCACGGGAATTTGATCGCTTTAATTGGGGGGTTTTACCATCTGAGGCATTTGGTGGAGCCGGTGGAGAATGAACCGGACCCGGTTTCGTTGTTCACGCTGCCTCTGTTCCATGTGTTTGGGTTTTTTATGCTGGTTAGGGCTATTTCCATGGGGGAGACGTTGGTTTTGATGGAGAGGTTCGATTTTGAAGGGATGTTGAAGGTGGTGGAGAGGTATAGGGTTACGTACATGCCGGTGTCGCCGCCGCTGATTGTGGCGCTTGCTAAGTCGGAGTTGGTGAACAAGTATGATATTAGCTCGCTCAGGTTGCTCGGCTGCGGCGGCGCGCCGCTGGGTAAGGAGGTGGCGGAGAAGTTCAATGAGAGATTTCCCGATGTACAAATTGTGCAGGGGTATGGTCTGACTGAAAGTGGAGGAGGAGCGACGAGAATGATAGGAGCTGAAGAAGCAAAGCGCCATGGCTCTGTGGGTCGTCTGGCGGAAAATATGGAAGCCAAGATTGTTGATCCTGTGAGTGGAGAGGCATTACCTCCTGGCCAGAAAGGGGAGCTATGGATCAGAGGTCCAACCATCATGAAAGGTTATGTAAGAAATGAGGAGGCAACAGCTGAAACATTGGATTCAGAGGGATGGCTGAAGACTGGTGatctttgttattttgactctcaTGGTTTCCTCTACATTGTAGATAGGCTTAAGGAATTGATCAAATACAAAGCTTATCAgGTTCCTCCAGCTGAATTGGAACACATTCTTCACACCAATCCTGAAATTGCTGATGCTGCTGTAATCCCGTATCCTGATGAAGATGCAGGGCAAATCCCAATGGCTTTTGTGGTAAGAAAGCCTGGAAGCAATATTACTGCACCTCAAGTAATGGATTTTGTCGCAAAGCAGGTTGCGCCATACAAGAAGATACGGCGTGTGGCCTTCATTAACGCTATACCTAAAAATCCTGCTGGAAAAATTTTGAGAAGAGAATTAGTGGAGTCTGTTCTATCTACTGCTTCCTCCAAATTGTAG 1641 0.5149 MADSIDPNSGFSSQSRTFHSLRPNVPLPPPSQPLSITNYALSLIPSTASSTTVLIDSTTHRRLSYSLFLRQVQNLSSSLSSLTPLCKGHVAFILSPPSLHIPVLYFSLLSLGVTVSPANPIGSHSEVAHQVQLAQPVIAFATSNTAHKIPKLQYGTVLIDSPLFLSMLEGTRDSGAGRAPIVRQSDTAAILFSSGTTGKVKGVMLSHGNLIALIGGFYHLRHLVEPVENEPDPVSLFTLPLFHVFGFFMLVRAISMGETLVLMERFDFEGMLKVVERYRVTYMPVSPPLIVALAKSELVNKYDISSLRLLGCGGAPLGKEVAEKFNERFPDVQIVQGYGLTESGGGATRMIGAEEAKRHGSVGRLAENMEAKIVDPVSGEALPPGQKGELWIRGPTIMKGYVRNEEATAETLDSEGWLKTGDLCYFDSHGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVIPYPDEDAGQIPMAFVVRKPGSNITAPQVMDFVAKQVAPYKKIRRVAFINAIPKNPAGKILRRELVESVLSTASSKL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0096 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Sto4g0096 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 535 - -
Sto4g0096 546 Gene3D - 20 439 IPR042099 -
Sto4g0096 546 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 18 535 - -
Sto4g0096 546 Pfam AMP-binding enzyme 50 444 IPR000873 -
Sto4g0096 546 Gene3D - 440 541 IPR045851 -
Sto4g0096 546 CDD 4CL 49 534 - -
Sto4g0096 546 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Sto4g0096 546 SUPERFAMILY Acetyl-CoA synthetase-like 46 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0096 Sto-Chr4 770567 772895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0096 5 546 Monolignol Biosynthesis Gene Families AT5G63380 63.604 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0096 K01904 - gmx:100777435 830.091