Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0081 ATGGCGGGACCTATGCTTCGTGCTCTCTTGTCCTCAACCAGAAAATCTTCTTCGTCGTCCCCTTTCACTCCCTATCGTTTCTTGTCGCGTGCCAGCATCATCTCACGCGCTTTCTCTGCAGCTCCGGCTACAGCCGCCGCCGATGAACCTAACAGCTCCCTCTGCCCCAGCCGTCTTCGTAACGTCGCTGTGATTGCTCACGTTGACCATGGCAAGACCACTCTCATGGATCGGCTGCTTCGTCAGTGTGGCGCCGACATCCCCCACGAGCGCGCCATGGATTCCATCAGTCTAGAGCGCGAGCGCGGTATCACAATCGCTTCCAAGGTTTGTGCATTCTTCCAAACGATTGCTTGGATTTGGATTGTGAATGTTACATCTATTCCATGGAAGGAAAATGAGCTAAACATGGTTGATACACCCGGACATGCAGATTTTGGTGGTGAAGTTGAACGAGTTGTTGGAATGGTTGAGGGAGCAGTACTGGTTGTAGATGCTGGTGAAGGCCCGCTTGCACAAACAAAATTTGTTCTTGCAAAAGCCTTAAAGTATGGGATAAGACCTCTTCTTCTTTTGAACAAAGTAGACCGACCTTCAGTTTCTGAGGAGAGATGTAATGAAGTTGAGAGTCTGGTATTTGATCTTTTTGCCAACCTTGGTGCTACAGAGGAGCAACTAGACTTCCCAGTTCTTTATGCTTCTGCTAAAGAAGGTTGGGCATCCACCACCTTTACCAAGGATCCTCCTGATGAGGCAAAAAATATGTCACAGCTTCTTGATGCCATTGTAACGCATGTCCCCCCACCAAAAGCAATAATTGACGGGCCTTTCCAGATGCTGGTTTCAATGATGGAACGGGATTTTTATCTTGGGCGAATTTTGACTGGACGTATTCATTCTGGGATTGTTCGTGTTGGTGACAGGGTTCATGGTCTACGTAATAAAGATTCTGGGGTAGAGAAGATTGAGGATGGAAAGGTTGTgaaattgatgaaaaagaagGGTACAAACATGGTTCCAATTGATTGTGCTGGAGCTGGTGATATAATTTCAATGGCTGGCTTGGCAAAACCAGTAATAGGCCAAACAGTAGCAACTGCAGagGTAATGTCTGCATTGCCCGCAGTTGAATTGGATCCTCCAACAATTTCCATGACTTTTAGTGTAAATGACTCTCCATTAGCTGGTCGTGATGGAACTCATTTGACTGGTGGAAGAATTGGAGACCGGCTAATGGCTGAAGCTGAAACAAATATTGCCATAAATGTGCTTCCAGGCTTATCAGATTCATTTGAAGTACAGGGAAGAGGAGAGCTACAATTGGGTATCCTGATTGAGAATATGAGGCGAGAAGGATTTGAGTTGTCTGTCTCTCCACCTAAAGTCATGTATAAAACTGAAAATGGCCAGAAACTTGAGCCAATTGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGGTTAGTAATGGAGGCCTTGTCTCATAGGCGAGCTGAAGTTACTGACATGGGTCCTGTCTCAGGAACTGTTGGTCGGACTAGATTGTCTTTGACTTGTCCATCAAGAGGCCTGGTTGGGTATAGGAGTGTGTTCAGCAGTGACACTCGTGGAACTGGCTTCATGCATCGCGCTTTCCTTAAGTATGAAAAGTATCGAGGTCCTCTTGGTAATGTCAGGAAAGGAGTACTGGTATCAATGGGCTTTGGTGCAATCAGAGCTTATGCATTAATGAGTTTAGAAGCTCGTGGGACTTTGTTTGTAACCCCAGGAATGGAGACATATGATGGAATGATTGTTGGTGAACATTCACGAGATACAGATCTTGATGTAAACCCAGTGAGAGCTAAGGAACTTACAAATATTCGTGCTGCTGGCAGTGATGAAGCTGTGAAGCTGTCACCTCCTCGCACTATGACACTTGAAGAAGCTATAGGGTATGTGGCTTCAGATGAGCTTATTGAGGTGACTCCAAAGGCTATACGGTTAAGGAAGAAATATCTTGATGTGAACAAGCGTAAAACCATGAGTAAAAAGCCGAAGGAATGA 2049 0.4514 MAGPMLRALLSSTRKSSSSSPFTPYRFLSRASIISRAFSAAPATAAADEPNSSLCPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVCAFFQTIAWIWIVNVTSIPWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGIRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPDEAKNMSQLLDAIVTHVPPPKAIIDGPFQMLVSMMERDFYLGRILTGRIHSGIVRVGDRVHGLRNKDSGVEKIEDGKVVKLMKKKGTNMVPIDCAGAGDIISMAGLAKPVIGQTVATAEVMSALPAVELDPPTISMTFSVNDSPLAGRDGTHLTGGRIGDRLMAEAETNIAINVLPGLSDSFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPIEEVTIEVNDEHVGLVMEALSHRRAEVTDMGPVSGTVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKYRGPLGNVRKGVLVSMGFGAIRAYALMSLEARGTLFVTPGMETYDGMIVGEHSRDTDLDVNPVRAKELTNIRAAGSDEAVKLSPPRTMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKTMSKKPKE 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0081 682 Gene3D Elongation Factor G (Translational Gtpase), domain 3 382 666 - -
Sto4g0081 682 Gene3D bipa protein 559 674 IPR042116 -
Sto4g0081 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 279 IPR027417 -
Sto4g0081 682 PANTHER ELONGATION FACTOR FAMILY PROTEIN 14 681 - -
Sto4g0081 682 CDD BipA_TypA_II 277 374 - -
Sto4g0081 682 Pfam Elongation factor Tu domain 2 291 364 IPR004161 GO:0005525
Sto4g0081 682 Gene3D Translation factors 273 375 - -
Sto4g0081 682 PRINTS GTP-binding elongation factor signature 61 74 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 PRINTS GTP-binding elongation factor signature 101 109 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 PRINTS GTP-binding elongation factor signature 136 146 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 PRINTS GTP-binding elongation factor signature 152 163 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 PRINTS GTP-binding elongation factor signature 188 197 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 SUPERFAMILY EF-G C-terminal domain-like 473 589 IPR035647 -
Sto4g0081 682 SUPERFAMILY Translation proteins 219 374 IPR009000 -
Sto4g0081 682 Gene3D - 464 558 - -
Sto4g0081 682 Gene3D - 57 270 IPR027417 -
Sto4g0081 682 Pfam Elongation factor G C-terminus 471 554 IPR000640 -
Sto4g0081 682 SUPERFAMILY EF-G C-terminal domain-like 379 462 IPR035647 -
Sto4g0081 682 TIGRFAM small_GTP: small GTP-binding protein domain 60 214 IPR005225 GO:0005525
Sto4g0081 682 CDD BipA_III 381 458 - -
Sto4g0081 682 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 14 681 - -
Sto4g0081 682 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 94 109 IPR031157 -
Sto4g0081 682 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 59 674 IPR006298 GO:0005525
Sto4g0081 682 CDD TypA_BipA 59 269 - -
Sto4g0081 682 Pfam Elongation factor Tu GTP binding domain 58 267 IPR000795 GO:0003924|GO:0005525
Sto4g0081 682 CDD BipA_TypA_C 473 553 IPR035651 -
Sto4g0081 682 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 57 270 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0081 Sto-Chr4 656049 665717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0081 58 197 Eukaryotic Initiation Factors Gene Family AT3G22980 37.671 4.28e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0081 K06207 - gmx:100789218 1107.82