Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0079 ATGCAAAGAAATAACAACGGGACACATGCAGCATGTGCAGCATGCAAGCATCAAAGGAAAAAGTGCAGCATAAATTGTGTGTTAGCACCATATTTTCCAGCAAGCCGAAACAGAGAATTTCAAGCAGTACACAAAGTTTTCGGAGTTAGCAACATCacaaaaatagttaaaaatgcAAAAGAAGACCAACGAACAAAGGTTGTAGATTCATTAGTATGGGAAGCATTTTGCAGGCAAAAAGATCCAATTGAAGGTGCTTATGGAGAATATAGAAAGGTTTATGACGAGTATAAAAAGCTCTTGCACGAGTCTAAGATAGAAAAAGATCACAATCAAATATTGCATTTACCATCTGTAAATCGTTTGATTGAATGGAACGGAAGCAAAGGGATGCACAGGGGAGAAGGAGTTGAGAATGGATTAGGTTTTATTCATGATCATCATAAGAATAATAGTATTATGGATTCTAATATTTATGGATTAGATTTTTCGCAAGAAATTGAGAATTTGAGGCCAGAAGTTGTTCTTAATCATCAATTTCAACATCATCACCATCAACCATACTATGTTTCGGGTCTCAAAGAAAAAGTGGTTTTTGTCATGGCACAATTGCCTCCCAAGATACCAAACATGACGCCAAATTGGTCTGACTTTTCTAATTCTCATCACCACATGGTGCCTTCTGCAGCAAGTTTGTCACCAAATGTTGCAGGAACTGCCACAACTGCAACCACCACCACTGCCAACTCCCAGCATGATCAGAATCAGAATCAGAATCCTTCCTGGGTGGATGAATTCCTGGATTTCTCAGCGGCGAGACGTGGGGCCCACCGGCGATCGGTGAGCGATTCCATTGCCTTCCTGGAGATGCCAATTCTGGATGAATGTGGTGTGAATTCTGGGAATATGAGGCCGAGGTTAGGGGCAGAGAATGAGTTTGACAGGTTTGATGATGAGCAGTTGATGTCCATGTTCGGTGATGAGATGTCTGGAGCTGCCATGCCACCCACCTTTTCCTCTTCAAATCCTTCAACCCCATCTGATAATAGCTTCAATGATGAGAAAGAAATTACGAACCAACACCAACAACACCAGAACCTGcagaaagagaaggaagatcAGCAGCACCAGCAACAACAGCAGCAGCAATTGATGAAAAATGAATCCGAAGAGGTTGAAAGCCAATGCAAACAGGAAACACAAGCTCCAAATAACACATTAACACCCTCTTCTTCCTGTGACAAGATTACTGATCCTAAGAGGGTCAAAAGAATATTGGCAAATAGGCAATCTGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCAGAGCTGGAACGTAGTGTAACTTCATTACAGGCTGAAGTTTCAGTACTGTCTCCAAGGGTTGCATTTTTAGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTTGCTCAAGATAAGATCTTTAAGGATGCTCATCAAGAGGCACTTAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCACCAACAAAACCTCAAGAAGATGGAATGTGGTGCAGGATCAGCATCCCCTTCACCAAATCCACAATGTAATGGTCTGACTGAAAAGGAACAGCTTCTCAACTTTGTTCTTCACTTGGAGCACATTCTGGAGGAACTGAAACCTTGCGTTTTGCATTCAACGCTTTTACTTGATCCTCAATGGCCAGCAATTTGTTACCCAGTAACTGAATTCCATTCAGATGATCTTCAAGTTTACCAATCCAGCCTCCTTCAAAATCTCTCAATTTCTTTTCAATCATCAAACGCTttatcctttcttcttcttctcgcttCAGACGTTCCTTTTCCAGTTCCATCACACTCAGAACAAGACCCCCAGACCCAGGTACATCCTTGTAAAGGGGTTCATCAGCTTGCGGACATCGGGATCTATATTCAGCAAATGCTTTTTGTGATTCCTTTAAGGCCTTTCTGTAGCCTTCCAGGAGGTTTGACATCATATAAAGTTCCTTCTCTAGCCGATACACCTCCATCTGTCTCTTCTGACTCTCTTCCATCTTTGCCTTGTGCAAATGATCAATCATGCTATCCCGCTTCTGCACTTCATTCAGCAAGATTTGTTGATGCATGGTTGACTCTTCACAAGACTGTTCTTTGGTTGCATACATCACTCTAG 2196 0.4098 MQRNNNGTHAACAACKHQRKKCSINCVLAPYFPASRNREFQAVHKVFGVSNITKIVKNAKEDQRTKVVDSLVWEAFCRQKDPIEGAYGEYRKVYDEYKKLLHESKIEKDHNQILHLPSVNRLIEWNGSKGMHRGEGVENGLGFIHDHHKNNSIMDSNIYGLDFSQEIENLRPEVVLNHQFQHHHHQPYYVSGLKEKVVFVMAQLPPKIPNMTPNWSDFSNSHHHMVPSAASLSPNVAGTATTATTTTANSQHDQNQNQNPSWVDEFLDFSAARRGAHRRSVSDSIAFLEMPILDECGVNSGNMRPRLGAENEFDRFDDEQLMSMFGDEMSGAAMPPTFSSSNPSTPSDNSFNDEKEITNQHQQHQNLQKEKEDQQHQQQQQQQLMKNESEEVESQCKQETQAPNNTLTPSSSCDKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMECGAGSASPSPNPQCNGLTEKEQLLNFVLHLEHILEELKPCVLHSTLLLDPQWPAICYPVTEFHSDDLQVYQSSLLQNLSISFQSSNALSFLLLLASDVPFPVPSHSEQDPQTQVHPCKGVHQLADIGIYIQQMLFVIPLRPFCSLPGGLTSYKVPSLADTPPSVSSDSLPSLPCANDQSCYPASALHSARFVDAWLTLHKTVLWLHTSL 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0079 731 MobiDBLite consensus disorder prediction 334 353 - -
Sto4g0079 731 Coils Coil 357 391 - -
Sto4g0079 731 Pfam Lateral organ boundaries (LOB) domain 11 105 IPR004883 -
Sto4g0079 731 ProSiteProfiles LOB domain profile. 10 113 IPR004883 -
Sto4g0079 731 Gene3D - 419 517 - -
Sto4g0079 731 SMART brlzneu 416 480 IPR004827 GO:0003700|GO:0006355
Sto4g0079 731 CDD bZIP_plant_RF2 421 471 IPR044759 GO:0003700|GO:0006355
Sto4g0079 731 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 418 470 IPR004827 GO:0003700|GO:0006355
Sto4g0079 731 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 201 546 - -
Sto4g0079 731 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 423 438 IPR004827 GO:0003700|GO:0006355
Sto4g0079 731 Pfam bZIP transcription factor 420 463 IPR004827 GO:0003700|GO:0006355
Sto4g0079 731 MobiDBLite consensus disorder prediction 230 260 - -
Sto4g0079 731 MobiDBLite consensus disorder prediction 354 376 - -
Sto4g0079 731 MobiDBLite consensus disorder prediction 396 415 - -
Sto4g0079 731 PANTHER BASIC LEUCINE ZIPPER 34 201 546 - -
Sto4g0079 731 SUPERFAMILY Leucine zipper domain 420 474 IPR046347 GO:0003700|GO:0006355
Sto4g0079 731 Coils Coil 499 519 - -
Sto4g0079 731 MobiDBLite consensus disorder prediction 328 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0079 Sto-Chr4 632120 641988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0079 201 498 bZIP Transcription Factor Family AT3G58120 56.369 5.65e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto4g0079 LOB 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0079 - - cam:101507538 419.083