Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0042 ATGGCGGCGATGAGAGCGGCAGTGGCGGCGCCTCGAGGTTTACGGCGACTATTCTCCACCACTCCAGCTTCTTCCTtcattcctcctcctccttccacGGCTGCACCTGTTCGAGAGAAGGCCGAGCCCAGCACCAATCTCTTCGTCTCTGGGCTTAGCAAACGTACTACTACAGAAAGGCTACGGGAGGCATTTTCTCAGTTCGGTGAAGTTGTTAATGCTAGAGTAGTAACTGACAGAGTATCAGGTTACTCTAAAGGGTTTGGTTTTGTAAGATATGCTACCATAGAAGAGGCTGGAAAGGGCATTGAAGGAATGGATGGAAAGTTCCTGGATGGTTGGGTTATATTTGCAGAGTATGCAAGACCAAGACCTCCTCCGGGACAGCCTGGACAACCAATGTCCCCTCCTTATGGCCAGCAGTGA 426 0.4836 MAAMRAAVAAPRGLRRLFSTTPASSFIPPPPSTAAPVREKAEPSTNLFVSGLSKRTTTERLREAFSQFGEVVNARVVTDRVSGYSKGFGFVRYATIEEAGKGIEGMDGKFLDGWVIFAEYARPRPPPGQPGQPMSPPYGQQ 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0042 141 MobiDBLite consensus disorder prediction 121 141 - -
Sto4g0042 141 MobiDBLite consensus disorder prediction 123 141 - -
Sto4g0042 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 47 113 IPR000504 GO:0003723
Sto4g0042 141 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 2 140 - -
Sto4g0042 141 SUPERFAMILY RNA-binding domain, RBD 27 138 IPR035979 GO:0003676
Sto4g0042 141 Gene3D - 22 130 IPR012677 -
Sto4g0042 141 SMART rrm1_1 46 119 IPR000504 GO:0003723
Sto4g0042 141 PANTHER TRANSFORMER-2-RELATED 2 140 - -
Sto4g0042 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 123 IPR000504 GO:0003723
Sto4g0042 141 MobiDBLite consensus disorder prediction 21 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0042 Sto-Chr4 380008 382104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0042 46 122 Eukaryotic Initiation Factors Gene Family AT2G23350 37.662 4.55e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0042 - - minc:123201372 197.593