Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0036 ATGGGTTCTGGTGGCTTGATCCAAGATGGAAATGGAAACCATATTGTCAGCTTCTCTCACTGTCCAGGTCGAGGTCATGCTCTTCTGAGTGAACTTTGGGCTCTCCAAATTGGCCTCCAAACAGCAATCTCTTTGAATATCCAGTTCCTGGAAATTGAAACCGACTCCATGGCAGTAAAGCAACTCTTAGACCACAATGACACTCCTAATACTAGTAAATACTTCACTCTTAAGCACACCGTTTTGGGCGCTGTGGAATGTGGATGCCAACTAAAGCGCTGCTGCCGATGTCGTTATCCTCATAGTATGGACTCACAGCAGCTTTTCAATTACAGTGTGAGTGGTGCTGGACTAACTTACAGCTTGCTTGGATCCTTGAAAGTTGACACAGGAAACTCACCTAATTCTCCCCTTTCCAGTCATTTCTCTGCATTGAGTGACAGCCACGATAACCACAATTATCAGGAAATCCTTTCTGGTGTGACCACATCACTGGACACTAATCACTTTCTGCATAGCTCACCCTCATCCCTCGAACGTCTCCAAGACGGTTTGCATCTGCATTCTGCTAGGAGCTCTCTTCTAAATGATGCTAGTTGCAACCTGGAAATGAGACACGTGCTGCTAGAATTGGAGACTGCTTTAATGGCCCCTGACAATAGTAATCAAGCTACAACATCAAATAGTTCTTTGGGTGAGAATGACACTTCTGGCCATACAAATAGATCTTGGAGCCATGACCACGAGGCCTTTCAATATTTACAAACTCAGCCATCTTTTCAAGTTGCACGTCTGGAGAAACGCTCGAAATCAATTGAGGATCAATCATTGCAAGGCTTCCCATCAAGCAATTTGAGGCAATTGTTGATTGCATGTGCAAAAGCTCTCTCAGagaacaacctgaaggatttTGATGAGTTAATCGAAAAGGCTAGAAGTTGTGTGTCTATTACCGGGGAGCCAATACAACGACTCGGTGCTTATTTGGTAGAAGGGCTTATAGCAAGGAAGGAGGCATCAGGGAACAACATATACCGTGCTCTCCGGTGCAGAGAGCCTGAAGGCCAAGACTTGCTCTCCTACATGCACATGATGTATGAAATCTGCCCATACTTGAAATTCGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCATGCAGAAATGAGAATCGCATTCACATCATAGACTTTCAGATTGCTCAGGGAAGTCAGTGGATGACTCTCCTTCAAGCTCTTGCAGCAAGACCTGGTGGTGCTCCCTATGTCCGGATCACGGGAATTGATGACCCCATGTCTAAATATGCTCGTGGTGATGGGCTTGAGGCAGTTGGGAACCGGTTGGCCGTAATCTCGGAGAAACTCGGTATCCCAATTGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGATGTGACAAGGGAGATGCTTGATGTGAGAGATGGAGAGGCTTTGGCTGTGAACTTTCCCTTGCAGCTTCACCACACAGCAGATGAGAGTGTTGATGTGAATAACCCGAGGGATGGACTTCTGAGAATGGTCAAGTCACTTTGTCCCAAGGTGGTCACATTGGTGGAGCAGGAATCAAACACAAACACAACTCCTTTCTTCAACAGGTTCATAGAAACCTTAGATTACTACTTGGCGATTTTCGAGTCCATCGATGTCACATTACCCAGGAACAAGAGGGAGAGGATTAATGTGGAGCAACACTGTTTGGCTAGGGATATTGTGAACATTATTGCTTGTGAAGGGAAGGATAGGGTGGAGCGACATGAACTGTTTGGAAAGTGGAAGTGTAGGTTGACCATGGCTGGTTTTCGTCAATGTCCAATGAGCTCGTACGTAAATTCGGTTATAAGAAGCTTGCTGAGATGCTATTCTGAGCATTATACACTTGTGGAGAAGGATGGGGCTATGCTATTAGGCTGGAAGAGCAGAAACTTAATATCAGCCTCAGCATGGCACTGA 1968 0.4533 MGSGGLIQDGNGNHIVSFSHCPGRGHALLSELWALQIGLQTAISLNIQFLEIETDSMAVKQLLDHNDTPNTSKYFTLKHTVLGAVECGCQLKRCCRCRYPHSMDSQQLFNYSVSGAGLTYSLLGSLKVDTGNSPNSPLSSHFSALSDSHDNHNYQEILSGVTTSLDTNHFLHSSPSSLERLQDGLHLHSARSSLLNDASCNLEMRHVLLELETALMAPDNSNQATTSNSSLGENDTSGHTNRSWSHDHEAFQYLQTQPSFQVARLEKRSKSIEDQSLQGFPSSNLRQLLIACAKALSENNLKDFDELIEKARSCVSITGEPIQRLGAYLVEGLIARKEASGNNIYRALRCREPEGQDLLSYMHMMYEICPYLKFGYMAANGAIAEACRNENRIHIIDFQIAQGSQWMTLLQALAARPGGAPYVRITGIDDPMSKYARGDGLEAVGNRLAVISEKLGIPIEFHGVPVFAPDVTREMLDVRDGEALAVNFPLQLHHTADESVDVNNPRDGLLRMVKSLCPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNKRERINVEQHCLARDIVNIIACEGKDRVERHELFGKWKCRLTMAGFRQCPMSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKSRNLISASAWH 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0036 655 ProSiteProfiles GRAS family profile. 276 655 IPR005202 -
Sto4g0036 655 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 655 IPR005202 -
Sto4g0036 655 Pfam Reverse transcriptase-like 2 77 IPR002156 GO:0003676|GO:0004523
Sto4g0036 655 SUPERFAMILY Ribonuclease H-like 2 65 IPR012337 -
Sto4g0036 655 Pfam GRAS domain family 285 654 IPR005202 -
Sto4g0036 655 MobiDBLite consensus disorder prediction 219 243 - -
Sto4g0036 655 CDD RNase_H_like 2 63 IPR044730 -
Sto4g0036 655 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 112 655 - -
Sto4g0036 655 Gene3D - 1 103 IPR036397 GO:0003676
Sto4g0036 655 MobiDBLite consensus disorder prediction 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0036 Sto-Chr4 335698 342283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0036 203 654 GRAS Transcription Factor Family AT5G48150 55.629 1.86e-174 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto4g0036 GRAS 8.8e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0036 - - adu:107462432 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0389 7 2851886 2855369 Sto4g0036 4 335698 342283 CCT