Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0026 ATGATGGTTATTACAAAGGCTAGCTTTTGCATCATTTTGGTTCTTCTTACAACAGCAGTAAGTTCAAAAGATTTGGACGAAACACAGGAAGTCCAAGACTTCCTTAGCCAACTACTCAATCCCGCATCTGGATTGTTGGATGAAGATACGGCAGAGTTTCTATGGACCACTTGCTCAGTAGATTTAATTCATTTGAAGGAAGAGGTTGGAGATCTTGGTTTGTGCTTCTCACAGGAATCACCGAGCAGTTGCACCAATGAAATTAGTTCAGAGATTCCGTCATTAGCACGAGAAAAcatccaaaaattaattaatgcttgCCATCCTCAATTGAAGGAAATCTTTCTTTACTGTTTGAGAAAGAATTATCTTCCACACCATGGTGTAACTAATGATGAGAATGATGAATACAATGTTTGGCATGCCACTTGTACCAAGTCACTTTTTTCCAGATCCAATGCTCCCAGAAGAAATCTGGGTCTTGAGTTGCCTCAACGCATGTCAATGCCACCTGGTCCTGGCCCTACAGTTAAATCACATATACGTGATCAAGAACAAGAGTCAAAGGAATCTGGATCTTCATCTCCTAAAAAGGAAACTTACCTAAAGGAGCAGATAAAGGCTTCTAAAAGTACTAAATctaaaaaggggaaaaaaaagaaggatgACAAAAACATGGTTATAATTGCTGCGGCTGCAGCTGCTGTGTCAGTGATACTTGTAGTGGTACTGCTTTGTCTTTGTTGCTGTTGTAGGAAAAGCCAAGATAGAAAATATGATGAAAGGCCCCTTCTCAGCTTGAGTAGGAGCGACCATTCTATTGGTTCTTCTCCCAGATATGCTTCAGGAAATTCAGTAAGAGATGAAAAATTTGGATTTCAGTCATCTGGTAATAATTCAATTGACCACAAAAGGGCTCCATCTCTGAATGGCAATTTTCCTGTTGAATCTGATGTGCAGGAAATTCCATCAACAGGAGATGCAGGTGCCGTTGCTGCCAGACCATCATTTGATCTGAAACCTCCCCCCGGTAGGGTGGGACCTAGCCCTTTGAAACCTCCTCCTGGCAGGCCAGATATTGCCCCTAAGCCACCTTCTTTTAAGGCTTCTAGTGATGCGGGTGGtgctcctgctcctgctcctccaccTCCACCTCCTGCACCCTCTCCCCCACAGCGTCCCAAAACTACTTCTGGACCTCCTCCTCCACCACTCCCAGCACTACCTGGTGCCAAAAAAGGTGCTGgtgcaccaccaccaccacctcctaGAAGTGGCCCGGCTCCTCCTCGACCACCTCCACCGATGGGTGCTAGGGCCACTCGCCCTTTAGCTATACCAAAAAAAGCAAAGGCTTCTGAGAATGCGGATGCCACTGATTCAGAAGGGGATGCTGGTGCTTCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAAGTTAATGCTAACGCAAATCAATCAATGGTTTGGACTCAGCTTAAAGCAGGATCATTCCAGTTGGATGAAGAGATGATGGAAACGCTTTTTGGCTATACCAATCCAGATAAAAACAAAGGTGAAATCAAGAAAAGATCTCCTTCCGTAGAGTTTATCCAGATTATTGACAAAAAGAAATCACAAAATTTGTCGATTACACTGCGAGCTTCAAACGTGAATACAGAAGAAATTTGTGATGCACTACTTGAAGGAAATGAGCTTCCCCCAGAGTTTCTTGAATCCTTACTGAAGATGGCACCAACATCGGATGAAGAACTTAAGCTCAGACTTTTTAATGGCAACCTATCTCAACTTGCGCCGGCTGAACGGTTTCTAAAGGCCCTTGTTGAAATTCCATTTTCTATTAAACGAATGGAAGCATTGCATTTTATGGGTACTCTTCAAGAGGAGCTGGCCAGTACTAAGGAGGCATTTGCAATTTTAGAGGTTGCTAGTAAGGAACTAAGAAGCAGTCGGTTGTTCTTGAAACTTTTAGAAGCTGTCTTAAAAACTGGGAACCGTATGAACAGTGGAACATACCGTGGTGGTGCGCAAGCATTTAAACTTGACACACTGCTTAAACTATCTGACGTAAAAGGAGTTGATGGGAAGACTACACTCTTACACTTTGTTGTTAAAGAGATAATCCGGTCTGAGGGCATAAGAGCACTTCGTGGGTCAAAAGAGAGTAAGAGTTTCTCTAGCATTAAAACTGAAGACCTTCTTGAGGAAGTCTCCACTGAATCAGAAGAACGCTATTGCGATCTTGGTCTTCAGGTGGTCTCACGTTTAAGCACTGAGCTTCAGAATGTCAAGAAAGCTGCAGCTCTAGATGCTGATAACTTAACAGGAACCACTGCTAAACTTGGGCATGGCATCTTAAGAACTAAAGATTTTTTAAACAAAGACCTAAAAGAATTAGAGGTAGAAAGTAGAGGAGGCTTTTATCAAACAGTGCAGAGTTTTGTGGAGAGTGCTGAGATTGAAGTGACAAGTCTGttggaagaagagaagaagatcaTGGATTTGGTGAAGAGTACAGGTGACTACTTCCATGGCAACTCCGGGAAAGATGAGGGGTTACGCTTGTTTGTCATAGTACGAGACTTCCTAATCATGTTGGATAAGGTGTGCAAGGAAGTGGGAGATGCACAGAAGAAGGCAGCAGCAGCAACAGCAAAACCTCATAAACAAGAACCTTCTAAAGTTGCTTCTTCTTCAAATACTCGCGCCCCACCTTCGCCCGATCCCCGAAAGCAAATCAAAGATAGGAGGAAGGATGACTTTAGTTCAGATGATGAGAGCTAA 2784 0.4127 MMVITKASFCIILVLLTTAVSSKDLDETQEVQDFLSQLLNPASGLLDEDTAEFLWTTCSVDLIHLKEEVGDLGLCFSQESPSSCTNEISSEIPSLARENIQKLINACHPQLKEIFLYCLRKNYLPHHGVTNDENDEYNVWHATCTKSLFSRSNAPRRNLGLELPQRMSMPPGPGPTVKSHIRDQEQESKESGSSSPKKETYLKEQIKASKSTKSKKGKKKKDDKNMVIIAAAAAAVSVILVVVLLCLCCCCRKSQDRKYDERPLLSLSRSDHSIGSSPRYASGNSVRDEKFGFQSSGNNSIDHKRAPSLNGNFPVESDVQEIPSTGDAGAVAARPSFDLKPPPGRVGPSPLKPPPGRPDIAPKPPSFKASSDAGGAPAPAPPPPPPAPSPPQRPKTTSGPPPPPLPALPGAKKGAGAPPPPPPRSGPAPPRPPPPMGARATRPLAIPKKAKASENADATDSEGDAGASKAKLKPFFWDKVNANANQSMVWTQLKAGSFQLDEEMMETLFGYTNPDKNKGEIKKRSPSVEFIQIIDKKKSQNLSITLRASNVNTEEICDALLEGNELPPEFLESLLKMAPTSDEELKLRLFNGNLSQLAPAERFLKALVEIPFSIKRMEALHFMGTLQEELASTKEAFAILEVASKELRSSRLFLKLLEAVLKTGNRMNSGTYRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVKEIIRSEGIRALRGSKESKSFSSIKTEDLLEEVSTESEERYCDLGLQVVSRLSTELQNVKKAAALDADNLTGTTAKLGHGILRTKDFLNKDLKELEVESRGGFYQTVQSFVESAEIEVTSLLEEEKKIMDLVKSTGDYFHGNSGKDEGLRLFVIVRDFLIMLDKVCKEVGDAQKKAAAATAKPHKQEPSKVASSSNTRAPPSPDPRKQIKDRRKDDFSSDDES 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0026 927 MobiDBLite consensus disorder prediction 878 927 - -
Sto4g0026 927 ProSiteProfiles Formin homology-2 (FH2) domain profile. 462 892 IPR015425 -
Sto4g0026 927 MobiDBLite consensus disorder prediction 268 441 - -
Sto4g0026 927 Gene3D Formin, FH2 domain 468 903 IPR042201 -
Sto4g0026 927 MobiDBLite consensus disorder prediction 376 440 - -
Sto4g0026 927 MobiDBLite consensus disorder prediction 341 362 - -
Sto4g0026 927 SUPERFAMILY Formin homology 2 domain (FH2 domain) 418 883 - -
Sto4g0026 927 MobiDBLite consensus disorder prediction 180 211 - -
Sto4g0026 927 PRINTS Proline rich extensin signature 341 353 - -
Sto4g0026 927 PRINTS Proline rich extensin signature 353 374 - -
Sto4g0026 927 PRINTS Proline rich extensin signature 375 391 - -
Sto4g0026 927 PRINTS Proline rich extensin signature 418 443 - -
Sto4g0026 927 MobiDBLite consensus disorder prediction 908 927 - -
Sto4g0026 927 MobiDBLite consensus disorder prediction 269 306 - -
Sto4g0026 927 Pfam Formin Homology 2 Domain 467 866 IPR015425 -
Sto4g0026 927 PANTHER FORMIN-LIKE PROTEIN 193 420 - -
Sto4g0026 927 PANTHER FORMIN-LIKE PROTEIN 2 185 - -
Sto4g0026 927 PANTHER FORMIN-LIKE PROTEIN 378 926 - -
Sto4g0026 927 SMART it6_source 462 881 IPR015425 -
Sto4g0026 927 MobiDBLite consensus disorder prediction 160 222 - -
Sto4g0026 927 PANTHER FORMIN-RELATED 2 185 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto4g0026 927 PANTHER FORMIN-RELATED 378 926 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto4g0026 927 PANTHER FORMIN-RELATED 193 420 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Sto4g0026 927 MobiDBLite consensus disorder prediction 891 906 - -
Sto4g0026 927 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0026 Sto-Chr4 276953 281521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0026 446 906 FH2 protein (formin) Gene Family AT2G43800 44.000 1.18e-113 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0026 - - tcc:18593693 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0396 7 2899011 2902027 Sto4g0026 4 276953 281521 CCT