Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3318 ATGCAAATCGAAAGCCTCGATGATTCGCCCATGTTTCGGCAACAGCTCCAAGGCTTGGAAGAAAATGCAGAGTCATTAAGATCCAGATGCTGGAAGTTCTACAAAGGATGTCGAAAGGAAGGGCTTGGAGAGAATTATGATGGGGACATTGCATTTGCAAATGCCCTCGAAACTTTTGGAGGAGGGCCAAGTGATCCtctttttaatgttttgggAGGATCTGTTATGACTAAATTTACTGTTGCTTTGAGAGAAATCAGTACATATAAGGAACTTCTTCGACAGCAGGTAGAGCACATGCTGAATGACAGATTACACCACTTTCTGAGTGTTGACATCAACGATGCTAAGGAATCCCGAAAGCGTTTTGACAAAGCCTCCATTCAATATGACCAGGCACGCGATAAGTTTTTGTCATTGAGGAAGAGCGCTAAGCTTGATACTGTGGCTGTCGTAGAAGAGGAATTGCATAATGCAAGAGATTCATTTGAGGAAGCCCGTTTCAACCTGGTTAGTGCTCTCAACCATATTGAGGCCAAGAAGAGGTTTGAGTTTATGGAGGCTGTGCCTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTTTTGCAACAGATGGAACCTTACATTAGCGAGGTTCTGACTATTGCACAACAATCAAGAGAAAATTACAATACGGAGCAGATTTCTCTACTTGAAAGAATTcaagaatataaaaaacaaattcaTCATGACAGTAAGCTATCCTTGAATGGCACTCATGGTTCTTCTAATAGAGAGATGCAGCATTTTTCTAGGATACCAAATGAAGTGGCCGATGCAGTAATGGAATCTGCCGCAAATGGAACGGTTCAAATTCTTCGACAAGGATATCTTTGCAAGCGATCCTCCAATCTGAGAGGTGCATGGAAGAGAAGGTATTTTGTTCTCGACAGTCGAGGAATGTTGTACTACCACCGCAAACCGGGGAACTGGTTGCAATTACACAGTAGCAATCAACCGTCTGCACAAAGGAATAGTGCCACTGAAATTGGAACTGGGCTTCTCAGCCGTCTCTCTCATCACCATGGAGCTGTCAATGAAGATAAAACTGTCGCACGTCGTGCATTGAACTTGCTTACCTCAACAATCAAGATGGATGCTGAACAGTCAGATTTAAGATTTTGCTTCAGGATTATTTCCCCAACAAAGAGCTGCACATTGCAGGCAGAAAATGCCATGGACCAGATGGATTGGATTGAAAAGATAACTGGAGTCATTGCCACCTTGTTGAGTGCCCAGACACTAGAAATGCCTCCATCAGCTGACTCAGAAAGCAATGAATGTAATAATGCCAGCAAGGGCAATATGTTAGAAGCTCCTCCAGGTGATGATCAGAGTATAAAAGCTGAAAAGACAATTGATGTTCTTAGAAGGGTATGTGGGAATGACAAGTGTGCTGATTGTGGTAAACCTGATCCAGACTGGGCATCCTTAAACCTCGGCATTCTTATATGCATTGAATGTTCTGGTGTACACCGTAATCTTGGTGTACATATATCTAAAGTAAGATCACTGACACTTGATGTGAAAGTTTGGGACTCCTCTGTTATAGGCATGTTTCAGTCGCTGGGTAACCTCTTTGCAAACTCAGTTTGGGAAGAGCGGTTGCATTCACCAAATAATTCACAAACAGATGATCTGCCTGTTGGTTCATTAAAGCTGAACAAAAGTAAGTTATTTCATGCAAAGAAACCAGAACCTGATGATCCTATTTCATTAAAGGAAAGGTTCATTCACGCTAAGTATTTGGAGAAAGTGTTtgttaagaagaagaaaagagatcgTATCCGTTCCCTGGGTCAACAGGTGTGGGAAAGCATCTGTGCGAATGATAAGAGAGCAGTGTACCGACACATTGTGAAGTCGGATGTGGATCTGAATACTATCAGTGAGGAAGCAACTCTGGGTGACTCCAACGCGCCTTCTTCAAGTAATATAGACTCGTCAACGAAAACTGAAATCCAACCGATAACAGAAGATAGACAAgatacttctacttctacttctactgtGCTTCACCAAGCATGTCTAACTGCCGATGCTAGCATGGTGGAGCTTCTTCTACAATATGGTGCAGATATAAATGCTCCAGATTCAAAAGGCCAGACACCATTGCATTACTGTATACTCAAAGGCAAGAGCGCAGCTGCAAAATTGCTTATTACCAGGGGAGCCAATCCACATGCCGCAGATAATGAAGGCAACACTCCGGTTGAGATCGCATCAAGATCCAATTCTATTAGCAGCGATGTTTTATCTCTCTTAACAAGCAGATAA 2331 0.4127 MQIESLDDSPMFRQQLQGLEENAESLRSRCWKFYKGCRKEGLGENYDGDIAFANALETFGGGPSDPLFNVLGGSVMTKFTVALREISTYKELLRQQVEHMLNDRLHHFLSVDINDAKESRKRFDKASIQYDQARDKFLSLRKSAKLDTVAVVEEELHNARDSFEEARFNLVSALNHIEAKKRFEFMEAVPGIMDAHLRYFQQGYQLLQQMEPYISEVLTIAQQSRENYNTEQISLLERIQEYKKQIHHDSKLSLNGTHGSSNREMQHFSRIPNEVADAVMESAANGTVQILRQGYLCKRSSNLRGAWKRRYFVLDSRGMLYYHRKPGNWLQLHSSNQPSAQRNSATEIGTGLLSRLSHHHGAVNEDKTVARRALNLLTSTIKMDAEQSDLRFCFRIISPTKSCTLQAENAMDQMDWIEKITGVIATLLSAQTLEMPPSADSESNECNNASKGNMLEAPPGDDQSIKAEKTIDVLRRVCGNDKCADCGKPDPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDSSVIGMFQSLGNLFANSVWEERLHSPNNSQTDDLPVGSLKLNKSKLFHAKKPEPDDPISLKERFIHAKYLEKVFVKKKKRDRIRSLGQQVWESICANDKRAVYRHIVKSDVDLNTISEEATLGDSNAPSSSNIDSSTKTEIQPITEDRQDTSTSTSTVLHQACLTADASMVELLLQYGADINAPDSKGQTPLHYCILKGKSAAAKLLITRGANPHAADNEGNTPVEIASRSNSISSDVLSLLTSR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3318 776 ProSiteProfiles Ankyrin repeat profile. 718 750 IPR002110 GO:0005515
Sto3g3318 776 MobiDBLite consensus disorder prediction 436 451 - -
Sto3g3318 776 Pfam Putative GTPase activating protein for Arf 470 608 IPR001164 GO:0005096
Sto3g3318 776 CDD ArfGap 471 600 - -
Sto3g3318 776 ProSiteProfiles Ankyrin repeat profile. 685 717 IPR002110 GO:0005515
Sto3g3318 776 SUPERFAMILY Ankyrin repeat 683 765 IPR036770 -
Sto3g3318 776 SMART arf_gap_3 468 613 IPR001164 GO:0005096
Sto3g3318 776 SMART PH_update 290 427 IPR001849 -
Sto3g3318 776 Gene3D - 282 439 IPR011993 -
Sto3g3318 776 Coils Coil 116 136 - -
Sto3g3318 776 Pfam PH domain 291 424 IPR001849 -
Sto3g3318 776 Pfam Ankyrin repeats (3 copies) 690 773 IPR002110 GO:0005515
Sto3g3318 776 PANTHER CENTAURIN/ARF 461 774 IPR045258 GO:0005096
Sto3g3318 776 PANTHER CENTAURIN/ARF 1 451 IPR045258 GO:0005096
Sto3g3318 776 CDD PH_ACAP 292 429 - -
Sto3g3318 776 Coils Coil 225 245 - -
Sto3g3318 776 ProSiteProfiles Ankyrin repeat region circular profile. 718 750 - -
Sto3g3318 776 Pfam BAR domain of APPL family 4 230 - -
Sto3g3318 776 Gene3D Arf GTPase activating protein 455 615 IPR038508 -
Sto3g3318 776 ProSiteProfiles PH domain profile. 289 425 IPR001849 -
Sto3g3318 776 SUPERFAMILY BAR/IMD domain-like 4 312 IPR027267 -
Sto3g3318 776 MobiDBLite consensus disorder prediction 436 463 - -
Sto3g3318 776 Gene3D - 662 776 IPR036770 -
Sto3g3318 776 Gene3D Arfaptin homology (AH) domain/BAR domain 3 248 IPR027267 -
Sto3g3318 776 SUPERFAMILY ArfGap/RecO-like zinc finger 468 608 IPR037278 -
Sto3g3318 776 CDD BAR_SFC_plant 15 213 IPR035670 -
Sto3g3318 776 SUPERFAMILY PH domain-like 245 425 - -
Sto3g3318 776 ProSiteProfiles ARF GTPase-activating proteins domain profile. 468 613 IPR001164 GO:0005096
Sto3g3318 776 MobiDBLite consensus disorder prediction 650 684 - -
Sto3g3318 776 PRINTS HIV Rev interacting protein signature 480 499 IPR001164 GO:0005096
Sto3g3318 776 PRINTS HIV Rev interacting protein signature 499 516 IPR001164 GO:0005096
Sto3g3318 776 PRINTS HIV Rev interacting protein signature 522 543 IPR001164 GO:0005096
Sto3g3318 776 ProSiteProfiles Ankyrin repeat region circular profile. 685 716 - -
Sto3g3318 776 SMART ANK_2a 718 747 IPR002110 GO:0005515
Sto3g3318 776 SMART ANK_2a 685 714 IPR002110 GO:0005515
Sto3g3318 776 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 461 774 - -
Sto3g3318 776 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 451 - -
Sto3g3318 776 SMART 5bar 5 216 IPR004148 GO:0005515|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3318 Sto-Chr3 37779189 37786565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3318 480 611 C2H2 Transcription Factor Family AT4G21160 42.857 2.43e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3318 K12489 - gmx:100797073 990.334