Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3307 ATGGAAAGAGATgtggaagagaaggaagaagaagagtacTTGTTTCCCATGTATTCGGATCGATCTGAACAAGACATGTCGGCTATGGTGTCTGCTCTTTCTCAAGTGATAGGTGCACCTCCTCCCACTACTTCTACTGGTACTTGTCTAGATCTTCAACCTAATTCTCATCAACAATCCCAATCCCAACAAGGCAACATAAGAAGAAGACACTACAGAGGAGTGAGACAAAGACCATGGGGTAAATGGGCGGCTGAGATTCGAGATCCCAAGAAAGCAGCCAGAGTTTGGCTTGGAACCTTCGAAACTGCAGAGGCAGCAGCACTTGCCTACGATGAAGCTGCTCTTAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTTCCCGAAAGGGTTTTGATGAGGCAATATGGCATGGAATGTGGTCCATATGATAATGGGCTTAATAAATTGTAA 453 0.4172 MERDVEEKEEEEYLFPMYSDRSEQDMSAMVSALSQVIGAPPPTTSTGTCLDLQPNSHQQSQSQQGNIRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVLMRQYGMECGPYDNGLNKL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3307 150 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Sto3g3307 150 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 MobiDBLite consensus disorder prediction 32 75 - -
Sto3g3307 150 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
Sto3g3307 150 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 11 138 - -
Sto3g3307 150 MobiDBLite consensus disorder prediction 32 68 - -
Sto3g3307 150 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 Pfam AP2 domain 71 120 IPR001471 GO:0003700|GO:0006355
Sto3g3307 150 PANTHER DNA-BINDING DOMAIN 11 138 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3307 Sto-Chr3 37704102 37710726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3307 14 133 AP2-EREBP Transcription Factor Family AT5G61890 64.885 2.94e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto3g3307 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3307 - - adu:107463444 166.007