Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3306 ATGGATCCCGACCCCTACACCACCAACATCTTCAAGTGGGACCCACGCAACATCCTCCCCCCGGCCGCTTCCACGCTTAACCGCCCTCCACCGCTTCTCGACTACACCGTTGCTCCTCCTCCCTCGTCCGCCCTGCAGGTGAGGAGGGAGGTGGGCGGGCTGGACCACCTCTTCCAAGCTTACGGCATAAGGTACTACACGGCGGCTAAGATAGCGGAGCTTGGTTTCACGGTGAGCACACTGGTGAACATGAAGGACGAGGAGCTTGAGGAGATGATGAACGGACTGTCTCAGATTTTCCGTTGGGATCTTCTGGTGGGTGAACGCTACGGTATCAAAGCCGCGGTGAGAGCCGAAAGACGGCGCATGGAAGAGGAGGAGACGCGGCGGCGAAACATTCAGTCGGCGGACACCACCACCAACACACTGGATGCTCTCTCCCAAGAAGGTGCATGCACCGGCCACCTAATTccttatcattaa 483 0.5756 MDPDPYTTNIFKWDPRNILPPAASTLNRPPPLLDYTVAPPPSSALQVRREVGGLDHLFQAYGIRYYTAAKIAELGFTVSTLVNMKDEELEEMMNGLSQIFRWDLLVGERYGIKAAVRAERRRMEEEETRRRNIQSADTTTNTLDALSQEGACTGHLIPYH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3306 160 PANTHER PROTEIN LEAFY 1 151 IPR002910 GO:0003677|GO:0006355
Sto3g3306 160 PANTHER PROTEIN LEAFY 1 151 - -
Sto3g3306 160 Coils Coil 116 136 - -
Sto3g3306 160 Pfam Floricaula / Leafy protein SAM domain 50 127 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3306 Sto-Chr3 37702580 37703062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3306 1 154 Orphan Transcription Factor Family AT5G61850 54.321 2.79e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Sto3g3306 SAM_LFY 1.1e-43 CL0003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3306 - - gsj:114416001 201.83