Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3281 ATGGGAAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGGAGCATGGACCAAAGAGGAAGACCAACGTCTCATCTCCTACATCAACCAACATGGTGAAGGTTGTTGGAGATCTCTTCCCAAAGCTGCTGgttTGCTTAGATGTGGGAAAAGTTGCAGACTGCGGTGGATTAACTATCTTCGACCTGATCTCAAAAGAGGCAATTTCACTGATGAAGAAGACGACCTCATCATTAACCTCCATAGCTTACTTGGAAACAAATGGTCACTTATAGCGGCGAGGCTACCAGGAAGAACAGACAAcgaaataaaaaactactggaaCACCCACATCAAGAGGAAGCTCTACAGCCGCGGAATCGACCCTCAGACCCACCGTCCACTAAACTCCGCCGCCGCCGTTGCTCCGCCTGTGACcacaaacaacaacaacaacaacaacaaaaacagcAATAGCAACGAAAACCACAGCGCCGCCACAAAATTCGAAATAACAAATGGAAGCGAAGAAGACTCAAATAGCAGCAGTGGCGTTACCACCGAGGAATTGATATCATCAGCCTCTCCTTTTCCTTCACATCTTCACACACTCAACTTAGATCTCAGTCTCACCATAGGCCTTCCTTAtagttataataataataataattctaaaaactCCAATTTTGTTGTCGTTAACCACACACACAGCTTGAAACGACAACGACAGCAAGAGCAGTGGTAcggcaataataataataataataaaggaattAGTGGTGACGGTGTGTGTTTGGGTTGCAGTCTAGGGTTTCAGAGTAGCACTGTTAAACAACCATGTACCTGCAAAGTCTTGAGGAGGAGTAGTAATAATAATGACACCTCTtcattttatttgtaa 882 0.398 MGRSPCCEKEHTNKGAWTKEEDQRLISYINQHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEDDLIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNSAAAVAPPVTTNNNNNNNKNSNSNENHSAATKFEITNGSEEDSNSSSGVTTEELISSASPFPSHLHTLNLDLSLTIGLPYSYNNNNNSKNSNFVVVNHTHSLKRQRQQEQWYGNNNNNNKGISGDGVCLGCSLGFQSSTVKQPCTCKVLRRSSNNNDTSSFYL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3281 293 CDD SANT 69 112 IPR001005 -
Sto3g3281 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sto3g3281 293 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 228 - -
Sto3g3281 293 CDD SANT 16 61 IPR001005 -
Sto3g3281 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sto3g3281 293 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sto3g3281 293 Gene3D - 14 66 - -
Sto3g3281 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sto3g3281 293 MobiDBLite consensus disorder prediction 135 156 - -
Sto3g3281 293 SMART sant 66 114 IPR001005 -
Sto3g3281 293 SMART sant 13 63 IPR001005 -
Sto3g3281 293 PANTHER TRANSCRIPTION FACTOR MYB7 1 228 - -
Sto3g3281 293 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Sto3g3281 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sto3g3281 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sto3g3281 293 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3281 Sto-Chr3 37499753 37501846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3281 1 207 MYB Transcription Factor Family AT4G09460 65.403 1.74e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto3g3281 Myb_DNA-binding 4.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3281 K09422 - gmx:778033 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3281 3 37499753 37501846 Sto3g3281 3 37499753 37501846 ECH