Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3265 ATGGAGACCTCGATTCTCTCCACCAACCCTTCCTTCATTCTCAAACTCACAGATTCAATTCAACTTCTCAGGTTGCCCTCGTCGGCGCCCACGTCTCCCCCATTGAGAGCCTCGATTACGAGTCTGTCTTGTCTTTCTTtgctttttcttcaattttcgatTCACAAGTTTCTCTGCGAATTCGCTCCTCaattcttgcttttccttttcttctcttctctctctgtCTGCAGGATTTTCGAGAACGAGTTCTTCAAGCAGGACTGGAGGAGCCGAGGGAAGCTTCAGATTTTCCAGTACGTGCTTATGAAATGGCTTTTGTGCGCCTTGATTGGATTGATTGTTAGTTTAATTGGGTTTTGCAATAATCTCGCCGTTGAGAATATCGCTGGCCTCAAGTTCGTCGTCACTTCGAATATGATGTTGCAGAGAAGGTTTGTGATGGCCTTTCTAGTGTTTTTTGCTTCCAATTTGGGGCTTACTCTTTTTGCTTCTGTAATAACGGCGTTTATAGCACCAGCTGCTACGGGTTCTGGTATACCTGAGGTGAAGGCCTACCTAAATGGTGTAGACGCACCAGGAATATATACTCTGCGAACTCTTTTCGTTAAGATTATTGGAAGCATTTCCGCAGTTTCATCATCCCTTCTTGTTGGGAAGGCAGGGCCTATGGTCCATACTGGTGCATGTGTGGCATCATTGTTGGGTCAGGGTGGATCAAAGAGATATGGATTAACTTGGAATTGGTTACggttttttaaaaatgatcGAGATCGACGGGATCTAATAATATGTGGATCAGCTGCTGGAATTACTGCTGCCTTTCGTGCTCCAGTTGGTGGAGTGTTGTTTGCTCTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGAGAGCTTTTTTCACAACAGCAATAGTTGCAATTGTGCTTCGTGCACTGATTGATGTTTGTTTAAGTGATGTGCCTTCTGTGTTCATTCTCGGAGTTATAGGGGGTATACTTGGAAGCTTATATAATTCGCTATTGACTATTGTTCTCCGTGCATACAATAGTATCCATGAGAAAGGCTTCGCTTACAAAATTTTGCTTGCTTGTATAATCTCCATTTTTACCTCCTGTCTCCTTTTTGGATTGCCATGGCTTGCATCTTGCCGACCTTGTCCACTTGATGCAACTGAGGCTTGTCCCACAATAGGCCGCTCTGGTAACTATAAGAAATTCCAATGCTCTCCTGGTCACTACAATGATCTTGCCAGTCTTATTTTTAACACCAATGACGATGCTATCAGAAATCTGTTTAGCAAGAACACAGATGAGGAgttttcatattcatcaatgCTCATCTTTTTTGTTACATGCTTTTTTCTAAGCATCTTCAGCTATGGAATTGTGGCTCCAGCTGGTCTTTTTGTGCCAGTTATTGTGACTGGTGCATCTTATGGACGTTTCTTTGGGATGTTGGTTGGCAAAAATTCAACTCTTAACCATGGCCTTTATGCTGTACTGGGTGCTGCTTCCTTACTTGGTGGATCTATGAGAATGACAGTTTCCCTAGCAGATGCTTTCAATGCAAATATATATGACCTTATCATGAAAGCCAAGGGGTTTCCTTATTTAGAAACTCATGCTGAACCATATATGAGGCAGCTAACAGTAGGCGATGTTGTCACAGGCCCACTTCAGCTCTTTAGTGGCATTGAGAAGGTTCGCAACATTGTGTTTGTTCTCAGAACTACGGGGCACAATGGGTTCCCTGTAATTGATGAGCCTCCATATTCTGAAGTACCAGTTTTATTTGGTGTAATTCTTCGTGCCCATCTTCTAACATTGTTAAAGAAGAAAGCTTTCCTGTCCAGACCAGTGGCAATTGGTGATGAAGCCTTCAATACGTTTTCTGCAGATGAATTTGCAAAGAGAGGTTCCGGCAATTATGACAATATAGACGATATACAGTTAACCGAGGAAGAGATGGACATGTTCATAGATCTACATCCGTTTACTAATGCTTCTCCTTATACTGTTGTGGAGACAATGTCACTGGGAAAGGCTCTTACTCTTTTTCGAGAAGTTGGTTTAAGACACCTTTTGGTGGTACCCAAGATCTCTGGTGTGAGTAATTCCGTCTTGCCTTATTGCCATTTTATAGAGCAAGTTAAATGTGGTCTAGTTGAGATCACCAGTTGTGGGTATACTGACAAGGCACGATTTTATGCCGGAACACATACTAGGTTTGAATCCTTTGCTGGCAAGAAGCAGGTGGAGAAGATTAAGAATTAA 2283 0.4131 METSILSTNPSFILKLTDSIQLLRLPSSAPTSPPLRASITSLSCLSLLFLQFSIHKFLCEFAPQFLLFLFFSSLSVCRIFENEFFKQDWRSRGKLQIFQYVLMKWLLCALIGLIVSLIGFCNNLAVENIAGLKFVVTSNMMLQRRFVMAFLVFFASNLGLTLFASVITAFIAPAATGSGIPEVKAYLNGVDAPGIYTLRTLFVKIIGSISAVSSSLLVGKAGPMVHTGACVASLLGQGGSKRYGLTWNWLRFFKNDRDRRDLIICGSAAGITAAFRAPVGGVLFALEEMASWWRSALLWRAFFTTAIVAIVLRALIDVCLSDVPSVFILGVIGGILGSLYNSLLTIVLRAYNSIHEKGFAYKILLACIISIFTSCLLFGLPWLASCRPCPLDATEACPTIGRSGNYKKFQCSPGHYNDLASLIFNTNDDAIRNLFSKNTDEEFSYSSMLIFFVTCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFFGMLVGKNSTLNHGLYAVLGAASLLGGSMRMTVSLADAFNANIYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQLFSGIEKVRNIVFVLRTTGHNGFPVIDEPPYSEVPVLFGVILRAHLLTLLKKKAFLSRPVAIGDEAFNTFSADEFAKRGSGNYDNIDDIQLTEEEMDMFIDLHPFTNASPYTVVETMSLGKALTLFREVGLRHLLVVPKISGVSNSVLPYCHFIEQVKCGLVEITSCGYTDKARFYAGTHTRFESFAGKKQVEKIKN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3265 760 Gene3D Clc chloride channel 96 542 - -
Sto3g3265 760 PRINTS Chloride channel signature 173 190 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 PRINTS Chloride channel signature 204 223 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 PRINTS Chloride channel signature 268 287 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 PRINTS Chloride channel signature 467 487 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 PRINTS Chloride channel signature 499 515 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 SUPERFAMILY Clc chloride channel 82 543 IPR014743 -
Sto3g3265 760 CDD CBS_pair_voltage-gated_CLC_euk_bac 544 702 - -
Sto3g3265 760 PRINTS Plant CLC chloride channel signature 78 86 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto3g3265 760 PRINTS Plant CLC chloride channel signature 289 297 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto3g3265 760 PRINTS Plant CLC chloride channel signature 303 313 IPR002251 GO:0005247|GO:0006821|GO:0016020
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 78 320 - -
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 320 520 - -
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 520 708 - -
Sto3g3265 760 Pfam Voltage gated chloride channel 161 520 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN 520 708 - -
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN 78 320 - -
Sto3g3265 760 PANTHER CHLORIDE CHANNEL PROTEIN 320 520 - -
Sto3g3265 760 SUPERFAMILY CBS-domain pair 544 702 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3265 Sto-Chr3 37393964 37397376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3265 78 704 Ion Channels AT5G33280 70.968 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3265 K05016 - zju:107428001 1031.55