Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3259 ATGGGTTCGTCCCCTCCGGTGAACTCTCTACCCGTAGCGTACCAAGCATGGACCAGTCTGGCCGTACCGGATTGGCTGAACAAAGGAGACAACGCGTGGCAGATGATCTCAGCCACTCTCGTCGGAATCCAAAGCATGCCTGGCCTCGTCATCCTCTACGGTTCCATCGTCAAGAAGAAATGGGCCGTCAATTCCGCCTTCATGGCCCTTTACGCTTTCGCCGCCGTCAGCATCTGTTGGGCCACTTGGGCCTACAAGATGTCCTTCGGCGAGAAGCTCTTGCCCTTTTGGGGCAAAGCTGGGCCCGCTTTGGGCCAGAAGTTCCTAATCAAGCAGGCCGCGCTGCCCGCGACGACGCATTACTTTAGCAACGGCGGGGTGGAGACGGCGGAGATCGAGCCGTACTACCCGATGGCGACGATGGTGTGGTTCCAGTGCGTGTTCGCGGCGATCGCGGTGGTGCTGCTGGCGGGTTCGGTGCTGGCTCGGATGAACTTCAAGGCGTGGATGATGTTTGTGCCGTTGTGGCTCACGTTTTCGTATACGGTGGGTGCGTTCAGCTTGTGGGGTGGTGGGTTCTTGTTCCATTGGGGTGTTATGGACTATTCTGGTGGCTATGTCATTCATCTCTCTTCTGGGATTGCTGGTTTCACAGCGGCTTATTGGgtgGGACCAAGATCGAAGAAGGATAGAGAAAGATTTCCACCAAACAATGTGTTACTAACCCTAGCGGGGGCGGGTCTATTGTGGTTAGGATGGGCTGGCTTCAACGGAGGGGACCCATACTCAGCCAACACCGACTCCTCCATGGCTGTCCTCAACACCAACATCTGCGCCGCCACCAGCCTCCTCGTCTGGACCTGGCTCGACGTCATCTTCTTCAAGAAGCCCTCTGTCATCGGAGCCGTTCAGGGCATGATCACCGGCCTCGTTTGCATCACTCCCGGCGCCGGTAATTACTATTACTATTGCCTTTCAATACTATACTTTACTATACAGTACTATACATTAAGGCAACAAGAGAGATAG 1029 0.551 MGSSPPVNSLPVAYQAWTSLAVPDWLNKGDNAWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVSICWATWAYKMSFGEKLLPFWGKAGPALGQKFLIKQAALPATTHYFSNGGVETAEIEPYYPMATMVWFQCVFAAIAVVLLAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGNYYYYCLSILYFTIQYYTLRQQER 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3259 342 PANTHER AMMONIUM TRANSPORTER MEP2 18 323 IPR001905 GO:0008519|GO:0016020|GO:0072488
Sto3g3259 342 ProSitePatterns Ammonium transporters signature. 201 226 IPR018047 GO:0008519|GO:0016020|GO:0072488
Sto3g3259 342 SUPERFAMILY Ammonium transporter 25 323 - -
Sto3g3259 342 Gene3D Ammonium transporter AmtB like domains 13 329 IPR029020 -
Sto3g3259 342 PANTHER AMMONIUM TRANSPORTER 18 323 - -
Sto3g3259 342 Pfam Ammonium Transporter Family 32 318 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3259 Sto-Chr3 37346650 37349378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3259 138 318 Inorganic Solute Cotransporters AT2G38290 79.006 2.20e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3259 K03320 - gmx:100785993 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3259 3 37346650 37349378 Sto3g3259 3 37346650 37349378 ECH