Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3228 ATGTCTGGaaaggggaagaggaaggatgAGCAGGACTGCGCTTCCGACGGCGACTCTGAGGGCCACGCGCCATCCAAGAAGTTCGCTAAGAAAGATTCCGATGACTCCGACGGCATCGTCGTCTGCGAGATTTCCAAGAACCGGAGGGTCACCGTGAGGAACTGGCAAGGGAAAGTTGTCGTGGATATTCGGGAATTTTATATGAAAGATGGGAAGCAAATGCCTGGGAAGAAAGGCATCTCATTGTCCATGGACCAGTGGAAAATGCTTCGGAATCATGTTGAAGAAATTGACAAGGCACTTAATGAGGATTCGTAG 318 0.4686 MSGKGKRKDEQDCASDGDSEGHAPSKKFAKKDSDDSDGIVVCEISKNRRVTVRNWQGKVVVDIREFYMKDGKQMPGKKGISLSMDQWKMLRNHVEEIDKALNEDS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3228 105 Gene3D Transcriptional Coactivator Pc4; Chain A 31 105 IPR009044 GO:0003677|GO:0006355
Sto3g3228 105 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Sto3g3228 105 PANTHER BNAC09G47220D PROTEIN 1 103 - -
Sto3g3228 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Sto3g3228 105 MobiDBLite consensus disorder prediction 1 36 - -
Sto3g3228 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 103 IPR045125 GO:0003713|GO:0060261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Sto3g3228 PC4 1.5e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3228 K25815 - gmx:100820368 160.614