Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3224 TTGAGTGACCTTCCTAAAGAATTATTTAACTTACAAGAGAAGTACTCATCCTCATGCAAAGTGTATAGTTTCCAAGAACTTGCATCCGCAACAGCTAACTTCTTTCCAGAAAATTTGGTTGGCCAAGGTGGTTGTAGTCATGTTTATAGAGGATATCTTCCAGATGGAAAGGAGTTGGCTGTAAAAATTTTGAAGCCATCAGAAGATGTGATAAAAGAGTTTGTTTCAGAAATTGAGATCATTACAACTTTGCATCATAAGAACATAATATCTCTATCTGGGTTTTGTTTTGATGGCAACATTTTACTATTGGTTTATGATTTTTTATCAAGAGGAAGCCTAGAAGAGAATATTCatgGTAATAAGAAGGACTATAATGCATTTGGTTGGCAAGAGAGGTATAAGGTAGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCACAAGCTGTGATCCATAGGGATGTAAAATCTTCTAACATCCTTCTTTCAGATGATTTTGAGCCTCAGCTGTCAGATTTTGGACTGGCCAGTTGGGGTTCTTCATCCCATGTTACTTGCACTGACGTGGCTGGAACCTTTGGATACCTGGCTCCAGAATACTTTATGCATGGTAAAATAACTGACAAAATTGATGTATATGCTTTTGGTGTTGTGCTCCTTGAGCTTCTCTCGGGCAGGAAGCCCATCAACGACAAATGCCCAAAGGGCCAAGAGAGTCTTGTGATGTGGGCAACACCAATTCTAAAGGATGGGAAGCTTTCCCAGTTGCTTGATTCAAGCATAGGTGGTGATCACCAACATTGGCAGATTGAAAGAATGGTTTTGGCTGCTACCCTTTGCATTAGACGAGCACCAAAATTTAGACCTCAAATCAGCATAATATTGAAACTTCTGCTTGGTGATGAAGAAGTAACAAGATGGGCAAAACAAGAAGTTAGTGAACCAGAAGAAGTTGATGACTTCGATGGGGAATCAAACAATATTCAGTCCCATCTGAACCTTGCATTGCTGGATGTGGAGGATGATGCATTTTCTATCAGTAGCACTGAGCAGAGTGTCTCATTGGAGGATTATTTGCAAGGGAGATGGAGTCGCTCCTCAAGTTTTGACTAA 1128 0.4043 LSDLPKELFNLQEKYSSSCKVYSFQELASATANFFPENLVGQGGCSHVYRGYLPDGKELAVKILKPSEDVIKEFVSEIEIITTLHHKNIISLSGFCFDGNILLLVYDFLSRGSLEENIHGNKKDYNAFGWQERYKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDDFEPQLSDFGLASWGSSSHVTCTDVAGTFGYLAPEYFMHGKITDKIDVYAFGVVLLELLSGRKPINDKCPKGQESLVMWATPILKDGKLSQLLDSSIGGDHQHWQIERMVLAATLCIRRAPKFRPQISIILKLLLGDEEVTRWAKQEVSEPEEVDDFDGESNNIQSHLNLALLDVEDDAFSISSTEQSVSLEDYLQGRWSRSSSFD 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3224 375 SMART serkin_6 34 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3224 375 Gene3D Transferase(Phosphotransferase) domain 1 109 326 - -
Sto3g3224 375 SUPERFAMILY Protein kinase-like (PK-like) 15 303 IPR011009 -
Sto3g3224 375 Gene3D Phosphorylase Kinase; domain 1 5 108 - -
Sto3g3224 375 ProSiteProfiles Protein kinase domain profile. 34 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3224 375 Pfam Protein kinase domain 38 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto3g3224 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Sto3g3224 375 PANTHER OS01G0253100 PROTEIN 3 369 IPR045271 GO:0004714|GO:0006468
Sto3g3224 375 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 3 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3224 Sto-Chr3 36984272 36985999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3224 17 296 Trihelix Transcription Factor Family AT1G68690 43.554 1.35e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto3g3224 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3224 - - gmx:100815722 612.838