Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3213 ATGAAGAATCAAGGGTGTGAGATTGAAGCCATAGGCATCAACTACAAGATCcatcatcacacacacacaaaaacagAGTGCCCAAAAACAGAGCACCCAAAAACAGAGTACCCAAAAGCAGAGCAACCAAAAACAAagcatgaagaagaagaagaaaatggggTGAAACATGTTCTCAAAGACGTGACTTTTCAAGCCAAGCCGATGGAAATTCTCGCCATTGTTGGCCCAAGTGGAGCTGGAAAATCATCCTTGCTTGAGATTCTTTCTGGGAAACTCACCCCACAAAGTGGGTCCATCTTGCTGAATCAAAAACCCATAGAAATCGCTCGCTTCAGGAAGATCTCAGGGTATGTCACACAGAATGATACTCTGTTTCCATTACTAACAGTTGAAGAAACCTTAATGTTCACTGCAAAGCTAAGGCTAAATCTCCCTCAAGACCAACTCTGCTTCAGAGTCAAATCCCTGATCCAAGAGTTGGGACTCTGCCACGTGGCCAACACACGGATTGGTGATGAAAGGGTTCGTGGGATTTCTGGGGGTGAGAAGAGAAGAGTCTCCATTGGTGTTGAAGCCATTCATGATCCTAAAGTTTTGATTTTGGATGAACCCACTTCAGGGCTTGATAGTAACTCTGCTTTTCAAATCATTGATATGCTTAAGGTTATGTGTGATTCAAGAGGGAGAACTATAATCCTTAGTATACATCAACCTGGGTTTAGGATTGTGAAGTTGTTCAATTCTATGTTGTTGTTGGCTAATGGTTGTGTGTTGCATCATGGGACTTCAGATTTGTTGGGTTTGAATCTCAGGTTAATGGGTTTGGAGCTTCCTCTTCATGTCAATGTTGTTGAATTTGCCATTGATTCTATAGAAATCATTCAGAAAAATAAGAAAGGGCAGCCCAGCGCACGACGAGACTCACACCAGGTGGAGTATGGGATGGAGGGCCAGATGTACGATGCAACCTTACCCCTGCAAGCAAGTGCACGACGAGACTCCCACCAAGCAGGGTCTGAGGAGGGTCAGATGATGTATGATGCAGCCTTACCATTACAACAAGCAGAGAGAGTGTTTTCAAGATTTGAACTCGTGACTTGCAGGTCACATGTTCAAGGTGAGAGTAGGAGTGGTAAGTTTACACTACAGCAGTTGTTTCAACAATCCAAGGTGATTGATGTTGAGGACAACCTCATTAACAATTCAGAAATGGAGGATTTTGCAAAATGTGATTTTGCAAATTCTAGGCTGAGAGAAACTATGATTCTGAGTCACAGGTTTGCCAAGAACATCTTCCGTACAAAAGAGCTATTTGCATGTAGGACCATTCAGATGCTGATTTCTGGTCTTGTTTTGGGCTCAATCTTCTGCAATCTCAAAGATGATCTAGTTGGAGCAGAAGAAAGGGTAGGCCTATTTGCTTTCATATTAACATTTCTTCTATCATCCACCATTGAAGCACTTCCCATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCAAGTGGAAGCTATAGGGTATCATCCTATTCCATAGCAAATGCCTTAGTCTACTTACCATTTCTACTAATCCTAGCCATTCTATTCACACTACCCTTGTATTGGATAGTGGGACTAAACAGTAATTTCACATCTTTCCTCCATTTCCTCTTGCTCATTTGGCTCATTCTCTACACAGCAAATTCAGTTGTGGTGTGTTTCAGTGCTTTAGTCCCTAACTTCATTGTGGGGAACTCTGTGATTTCTGGTGTGATGGGGTCATTCTTCTTGTTCTCTGGCTACTTCATATCAAAACATGAGATCCCAAATTATTGGATCTTCATGCATTATATGTCTCTCTTCAAGTATCCCTTTGAAGGGTTTTTGATCAATGAGTTTTCTGACTCAGGGAAGTGTTTGGAGTACATGTTTGGGGCATGTGTTGTGAGTGGGGAGGATGTGCTTAAAGAAGAAGGATATGGGGGTACAGGTGCTCAATAA 1989 0.4108 MKNQGCEIEAIGINYKIHHHTHTKTECPKTEHPKTEYPKAEQPKTKHEEEEENGVKHVLKDVTFQAKPMEILAIVGPSGAGKSSLLEILSGKLTPQSGSILLNQKPIEIARFRKISGYVTQNDTLFPLLTVEETLMFTAKLRLNLPQDQLCFRVKSLIQELGLCHVANTRIGDERVRGISGGEKRRVSIGVEAIHDPKVLILDEPTSGLDSNSAFQIIDMLKVMCDSRGRTIILSIHQPGFRIVKLFNSMLLLANGCVLHHGTSDLLGLNLRLMGLELPLHVNVVEFAIDSIEIIQKNKKGQPSARRDSHQVEYGMEGQMYDATLPLQASARRDSHQAGSEEGQMMYDAALPLQQAERVFSRFELVTCRSHVQGESRSGKFTLQQLFQQSKVIDVEDNLINNSEMEDFAKCDFANSRLRETMILSHRFAKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLVGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSSGSYRVSSYSIANALVYLPFLLILAILFTLPLYWIVGLNSNFTSFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKHEIPNYWIFMHYMSLFKYPFEGFLINEFSDSGKCLEYMFGACVVSGEDVLKEEGYGGTGAQ 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3213 662 Pfam ABC-2 type transporter 421 629 IPR013525 GO:0016020|GO:0140359
Sto3g3213 662 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
Sto3g3213 662 SMART AAA_5 68 265 IPR003593 -
Sto3g3213 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 655 - -
Sto3g3213 662 MobiDBLite consensus disorder prediction 20 54 - -
Sto3g3213 662 Gene3D - 42 295 IPR027417 -
Sto3g3213 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 265 IPR027417 -
Sto3g3213 662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 655 - -
Sto3g3213 662 Pfam ABC transporter 59 207 IPR003439 GO:0005524
Sto3g3213 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 280 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto3g3213 Sto-Chr3 36902671 36904741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3213 58 309 Calmodulin-binding Proteins AT2G36910 25.475 1.53e-13 72.4